LOCUS AEC09613.1 334 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger) protein-
like protein protein.
ACCESSION CP002685-5758
PROTEIN_ID AEC09613.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38920"
/gene_synonym="T7F6.9"
/gene_synonym="T7F6_9"
/inference="Similar to RNA sequence,
EST:INSD:EG427447.1,INSD:EG427496.1,INSD:EG427462.1,
INSD:EG427495.1,INSD:EG427480.1,INSD:EG427487.1,
INSD:EG427465.1,INSD:AU240042.1"
/note="SPX (SYG1/Pho81/XPR1) domain-containing protein /
zinc finger (C3HC4-type RING finger) protein-related;
FUNCTIONS IN: zinc ion binding; EXPRESSED IN: male
gametophyte, flower, pollen tube; EXPRESSED DURING: M
germinated pollen stage, 4 anthesis; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type, conserved site
(InterPro:IPR017907), Zinc finger, RING-type
(InterPro:IPR001841), SPX, N-terminal
(InterPro:IPR004331); BEST Arabidopsis thaliana protein
match is: SPX (SYG1/Pho81/XPR1) domain-containing protein
(TAIR:AT1G02860.2); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G38920"
/db_xref="TAIR:AT2G38920"
intron_pos 70:1 (1/5)
intron_pos 152:0 (2/5)
intron_pos 236:0 (3/5)
intron_pos 282:0 (4/5)
intron_pos 301:2 (5/5)
BEGIN
1 MKFGETFTEY LHGEEEWFLE KCRFVEYKKL KKVLKKCKTC NSTKSDDGQI IPSATSSSLS
61 DSCECKACPW CDQMFFEELM KEATDIAGFF RSRVRHLLHL HVATGMQRYM IRLRRCFTDE
121 KQALVQEGQI LIQYITMNAI AIRKILKKYD KVHSSENGKN FKLKMRAERI ELLHSPWLIE
181 LGAFYLNSGL DNVGNFKNSF GRVACENLNE DQPVLKLMLP NSIELEYDLT CAICLETVFN
241 PYALKCGHIF CNSCACSAAS VLIFQGIKAA PRHSKCPICR EAGVYAEAVH MIELHLLLKT
301 RKEYWKERMM NERSEMVKQS KMFWNEQTKH MIGY
//