LOCUS AEC09593.1 602 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Guanylate-binding family protein protein.
ACCESSION CP002685-5733
PROTEIN_ID AEC09593.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38840"
/gene_synonym="F13I13.7"
/gene_synonym="F13I13_7"
/inference="Similar to RNA sequence,
EST:INSD:EG498019.1,INSD:AA394511.1,INSD:EG498018.1,
INSD:EL077200.1,INSD:EL113706.1,INSD:EL216733.1,
INSD:AI996888.1,INSD:EL135749.1,INSD:ES064561.1,
INSD:T45725.1,INSD:EH966187.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820252.1,INSD:BT012131.1,INSD:BT012402.1"
/note="Guanylate-binding family protein; FUNCTIONS IN: GTP
binding, GTPase activity; INVOLVED IN: immune response;
LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; CONTAINS
InterPro DOMAIN/s: Guanylate-binding protein, N-terminal
(InterPro:IPR015894), Guanylate-binding protein,
C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana
protein match is: Guanylate-binding family protein
(TAIR:AT5G46070.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G38840"
/db_xref="TAIR:AT2G38840"
intron_pos 30:2 (1/16)
intron_pos 65:0 (2/16)
intron_pos 88:1 (3/16)
intron_pos 101:1 (4/16)
intron_pos 140:2 (5/16)
intron_pos 160:0 (6/16)
intron_pos 181:2 (7/16)
intron_pos 184:0 (8/16)
intron_pos 204:1 (9/16)
intron_pos 224:1 (10/16)
intron_pos 231:0 (11/16)
intron_pos 253:0 (12/16)
intron_pos 309:0 (13/16)
intron_pos 395:0 (14/16)
intron_pos 466:0 (15/16)
intron_pos 556:2 (16/16)
BEGIN
1 MEIPRRTFVF FFSLCLLSST SLSIDNFHQA FPIVEPAPGH TKLQLSREGL EAISRITTPI
61 SAVAVIGPYR SGKSFLLNQL LSLSCYEGFG VGHMRDTKTK GIWVWGTPLE LEIDGVKTSV
121 IYLDTEGFES VGKSNVYDDR IFALATVMSS VLIYNLPETI READISRLSF AVELAEEFYG
181 RVKGEDVAFE PSKLLWLIQR DFLQGKSVKQ MVDEALRHVP NEDGNKNIDQ VNQIRDSLAI
241 MGDNSTAFSL PQPHLMRTKL CDLKDEDLDS TYVARRDQLK KLVASIIRPK IVQGKTLNGK
301 EFISFLEQIL DALNKGEIPS TGSLVEVFNK DIVERCVKLY NEKMVRVRLP MSEESLQSAH
361 EMAHNEAIKA FDAQHFGRQH AKKSVDQLDE QMQEVYKNFV LANEYQSSKL CEALYTSCED
421 DMDHLQALRL PSMAKFNAGF VYCNKTFEQQ CVGPSKQNYE QRLTKMMGKS RSLFIKEYNN
481 RLFNWLVGFS LVMVVVGRFI IKFILLEMAA WILFIFLETY TRMFWTAEAL YYNPVWHFIV
541 GTWENVVYSP VLDLDRWAIP IVCIIALCVL YWRCYGKRKH GARWLLPLYN NQKNGRNRER
601 SE
//