LOCUS AEC09590.2 214 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA-directed RNA polymerase subunit
beta-beta protein, putative (DUF506) protein.
ACCESSION CP002685-5730
PROTEIN_ID AEC09590.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38820"
/gene_synonym="F13I13.5"
/gene_synonym="F13I13_5"
/inference="Similar to RNA sequence,
EST:INSD:EL151193.1,INSD:EL165185.1,INSD:AV823888.1,
INSD:BX834684.1,INSD:DR364930.1,INSD:DR364928.1,
INSD:EL012816.1,INSD:EL057078.1,INSD:BX837812.1,
INSD:AV805154.1,INSD:BP629029.1,INSD:BP832837.1,
INSD:DR364929.1,INSD:BP835495.1,INSD:BP830968.1,
INSD:BP821358.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY081624.1,INSD:AY059934.1"
/note="Protein of unknown function (DUF506); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF506,
plant (InterPro:IPR006502); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF506)
(TAIR:AT3G22970.1); Has 400 Blast hits to 398 proteins in
24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 398; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink)."
/db_xref="Araport:AT2G38820"
/db_xref="TAIR:AT2G38820"
intron_pos 126:0 (1/1)
BEGIN
1 MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS
61 RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC FSGSGTESSD DETECSSGEA
121 CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR
181 WEKSPSCPAG IVYNSLSSVK RQSCKAKPFL RLLA
//