LOCUS AEC09559.1 467 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002685-5675
PROTEIN_ID AEC09559.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38630"
/gene_synonym="T6A23.17"
/gene_synonym="T6A23_17"
/inference="Similar to RNA sequence,
EST:INSD:ES104889.1,INSD:EG433305.1,INSD:DR381753.1,
INSD:ES187795.1,INSD:DR285776.1,INSD:T43523.1,
INSD:T42372.1,INSD:EG433302.1,INSD:AA395313.1,
INSD:EG433304.1,INSD:EG433300.1,INSD:EG433299.1,
INSD:EL034195.1,INSD:EL327071.1,INSD:AI994466.1,
INSD:AU236820.1,INSD:EG433306.1,INSD:ES109582.1,
INSD:EG433303.1,INSD:EG433297.1,INSD:EG433294.1,
INSD:EH848489.1,INSD:AU227815.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT004257.1,INSD:BT005523.1,INSD:AY501351.1"
/note="Transducin/WD40 repeat-like superfamily protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing
domain (InterPro:IPR011046); BEST Arabidopsis thaliana
protein match is: Transducin/WD40 repeat-like superfamily
protein (TAIR:AT3G54190.1); Has 139 Blast hits to 135
proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 105; Viruses - 0; Other
Eukaryotes - 34 (source: NCBI BLink)."
/db_xref="Araport:AT2G38630"
/db_xref="TAIR:AT2G38630"
intron_pos 67:0 (1/7)
intron_pos 116:1 (2/7)
intron_pos 166:2 (3/7)
intron_pos 208:2 (4/7)
intron_pos 235:2 (5/7)
intron_pos 300:0 (6/7)
intron_pos 390:1 (7/7)
BEGIN
1 MMEGRRIIAN PRPCSGSRRV IAKKRSRPDG FVNSVKKLQR REISSRMDRA FSISTAQERF
61 RNMRLVEQYD THDPKGYCLV SLPNLLKRSK VIEIVAARDI VFALTLSGVC ASFSRETNKK
121 VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF
181 ESESLKWPGF VEFDDVNGKV LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML
241 LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301 RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN
361 TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT GKCLAKIKAN NGPPKEEDCS
421 SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
//