LOCUS AEC09549.1 335 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transmembrane proteins 14C protein.
ACCESSION CP002685-5659
PROTEIN_ID AEC09549.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38550"
/gene_synonym="T6A23.25"
/gene_synonym="T6A23_25"
/inference="Similar to RNA sequence,
EST:INSD:DR334492.1,INSD:DR334495.1,INSD:BP583485.1,
INSD:BP856676.1,INSD:DR334479.1,INSD:DR334494.1,
INSD:BP798344.1,INSD:EH831845.1,INSD:DR334499.1,
INSD:EH987616.1,INSD:ES200221.1,INSD:EL340281.1,
INSD:DR334497.1,INSD:ES051621.1,INSD:AV783266.1,
INSD:BP572357.1,INSD:BX835328.1,INSD:BP571121.1,
INSD:DR334488.1,INSD:ES139872.1,INSD:DR334482.1,
INSD:EG512886.1,INSD:DR334496.1,INSD:DR334493.1,
INSD:EL040191.1,INSD:BP859497.1,INSD:ES128240.1,
INSD:DR373989.1,INSD:EH844845.1,INSD:DR240176.1,
INSD:DR334498.1,INSD:ES128944.1,INSD:BX838890.1,
INSD:BP572981.1,INSD:DR334490.1,INSD:EH866663.1,
INSD:DR334489.1,INSD:AV808553.1,INSD:EL997916.1,
INSD:CF773851.1,INSD:BP784000.1,INSD:DR334491.1,
INSD:ES203572.1,INSD:EG519314.1,INSD:AV817867.1,
INSD:DR334485.1,INSD:ES210425.1,INSD:ES175367.1,
INSD:DR227344.1,INSD:EG519313.1,INSD:EH964560.1,
INSD:DR334487.1,INSD:EG512897.1,INSD:BE527667.1,
INSD:ES104571.1,INSD:EL119543.1,INSD:BP668511.1,
INSD:ES102557.1,INSD:DR378819.1,INSD:ES024129.1,
INSD:DR334483.1,INSD:BP569658.1,INSD:ES144419.1,
INSD:EH940956.1,INSD:DR334481.1,INSD:EH974554.1,
INSD:AV822487.1,INSD:DR334486.1,INSD:Z30848.1,
INSD:DR334484.1,INSD:ES044163.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819138.1,INSD:AY133772.1,INSD:AY086533.1,
INSD:BX818848.1,INSD:AY035020.1"
/note="Transmembrane proteins 14C; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plastid, chloroplast inner membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0136,
Transmembrane (InterPro:IPR005349); BEST Arabidopsis
thaliana protein match is: Transmembrane proteins 14C
(TAIR:AT3G57280.1); Has 138 Blast hits to 137 proteins in
31 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi -
5; Plants - 115; Viruses - 7; Other Eukaryotes - 5
(source: NCBI BLink)."
/db_xref="Araport:AT2G38550"
/db_xref="TAIR:AT2G38550"
intron_pos 82:0 (1/5)
intron_pos 212:1 (2/5)
intron_pos 268:1 (3/5)
intron_pos 285:0 (4/5)
intron_pos 297:2 (5/5)
BEGIN
1 MMSIPMELMS IRNPNSTLLY RAHSRPPVKL CAPPRSLLPS RRHFSAPRAV VSYPGIRFGF
61 TSPEVLLNRS VVAFAASHED SGESGVEVGK EKSDIDVEDD TSKEAWKQTL ESFKEQVSKM
121 QSVSSEAYSV NSQKAMTVLK ETSEQLRIQA EKAKEELGTK AKVVSEEGRE YILKAAEESP
181 SDVKEIVEAF ASTEDLKNVS RANDFHVGIP YGLLLLVGGF INFMVSGSIP AIRFGVILGG
241 ALFALSLASL KSHRKGESST KFLKGQMAIV AIIFLRELRL LLSQKSTFLG FFTTLTSGGV
301 LGFYLYKMVV KREKGPTLED GGEDESSDGF VRSEG
//