LOCUS AEC09535.1 453 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-5638
PROTEIN_ID AEC09535.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38420"
/gene_synonym="T19C21.9"
/gene_synonym="T19C21_9"
/inference="Similar to RNA sequence,
EST:INSD:EH886802.1,INSD:BP562426.2,INSD:EH935463.1,
INSD:DR231039.1,INSD:ES203762.1,INSD:AV814208.1,
INSD:ES107508.1,INSD:EH882444.1,INSD:EL294596.1,
INSD:EL969024.1,INSD:ES126970.1,INSD:ES026979.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY140078.1,INSD:BX820983.1,INSD:BT008752.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT1G63130.1); Has 26299 Blast hits to 8886
proteins in 261 species: Archae - 3; Bacteria - 26;
Metazoa - 362; Fungi - 517; Plants - 24480; Viruses - 0;
Other Eukaryotes - 911 (source: NCBI BLink)."
/db_xref="Araport:AT2G38420"
/db_xref="TAIR:AT2G38420"
BEGIN
1 MARSSSWHRM SNFMRKYRKI PHSSFKTKWN ENLKQKYAME ELRSNLLTDS ENASVMRTLL
61 SSFQLHNCEP TPQAYRFVIK TLAKSSQLEN ISSVLYHLEV SEKFDTPESI FRDVIAAYGF
121 SGRIEEAIEV FFKIPNFRCV PSAYTLNALL LVLVRKRQSL ELVPEILVKA CRMGVRLEES
181 TFGILIDALC RIGEVDCATE LVRYMSQDSV IVDPRLYSRL LSSVCKHKDS SCFDVIGYLE
241 DLRKTRFSPG LRDYTVVMRF LVEGGRGKEV VSVLNQMKCD RVEPDLVCYT IVLQGVIADE
301 DYPKADKLFD ELLLLGLAPD VYTYNVYING LCKQNDIEGA LKMMSSMNKL GSEPNVVTYN
361 ILIKALVKAG DLSRAKTLWK EMETNGVNRN SHTFDIMISA YIEVDEVVCA HGLLEEAFNM
421 NVFVKSSRIE EVISRLCEKG LMDQAVELLA HLV
//