LOCUS AEC09525.1 244 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002685-5627
PROTEIN_ID AEC09525.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DREB19"
/locus_tag="AT2G38340"
/gene_synonym="dehydration response element-binding
protein 19"
/gene_synonym="T19C21.17"
/gene_synonym="T19C21_17"
/inference="Similar to RNA sequence,
EST:INSD:DR751388.1,INSD:EL092914.1,INSD:AV810921.1,
INSD:BP588793.1,INSD:BP639707.1,INSD:BP657612.1,
INSD:BP657809.1,INSD:BP651353.1,INSD:DR751389.1,
INSD:EL246561.1,INSD:AV830252.1,INSD:AU227884.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY072421.1,INSD:BT006276.1"
/note="Integrase-type DNA-binding superfamily protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus,
chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: 4 anthesis, petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: DNA-binding,
integrase-type (InterPro:IPR016177), Pathogenesis-related
transcriptional factor/ERF, DNA-binding
(InterPro:IPR001471); BEST Arabidopsis thaliana protein
match is: Integrase-type DNA-binding superfamily protein
(TAIR:AT2G40340.1); Has 5061 Blast hits to 5054 proteins
in 220 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 5051; Viruses - 0; Other Eukaryotes -
10 (source: NCBI BLink)."
/db_xref="Araport:AT2G38340"
/db_xref="TAIR:AT2G38340"
BEGIN
1 MEKEDNGSKQ SSSASVVSSR RRRRVVEPVE ATLQRWEEEG LARARRVQAK GSKKGCMRGK
61 GGPENPVCRF RGVRQRVWGK WVAEIREPVS HRGANSSRSK RLWLGTFATA AEAALAYDRA
121 ASVMYGPYAR LNFPEDLGGG RKKDEEAESS GGYWLETNKA GNGVIETEGG KDYVVYNEDA
181 IELGHDKTQN PMTDNEIVNP AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE
241 YFRF
//