LOCUS AEC09511.1 309 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pyridoxine biosynthesis 1.1 protein.
ACCESSION CP002685-5613
PROTEIN_ID AEC09511.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PDX1.1"
/locus_tag="AT2G38230"
/gene_synonym="ARABIDOPSIS THALIANA PYRIDOXINE
BIOSYNTHESIS 1.1"
/gene_synonym="ATPDX1.1"
/gene_synonym="F16M14.16"
/gene_synonym="F16M14_16"
/gene_synonym="pyridoxine biosynthesis 1.1"
/inference="Similar to RNA sequence,
EST:INSD:DR312579.1,INSD:BP560794.1,INSD:DR312590.1,
INSD:EL296172.1,INSD:BP636412.1,INSD:EH808654.1,
INSD:AV783088.1,INSD:EL262372.1,INSD:DR312607.1,
INSD:DR312603.1,INSD:BP609848.1,INSD:AV524586.1,
INSD:DR312574.1,INSD:DR312582.1,INSD:BP590977.1,
INSD:AI997026.1,INSD:EL114429.1,INSD:EH874996.1,
INSD:EH806863.1,INSD:EL047102.1,INSD:EH941029.1,
INSD:DR312593.1,INSD:EL062480.1,INSD:EL331064.1,
INSD:AV439508.1,INSD:BE529633.1,INSD:DR312612.1,
INSD:EH964469.1,INSD:EH858543.1,INSD:R84084.1,
INSD:EL160893.1,INSD:T76249.1,INSD:EL203783.1,
INSD:EL169051.1,INSD:DR312610.1,INSD:EL086993.1,
INSD:EH912908.1,INSD:EL102752.1,INSD:EL002045.1,
INSD:BP643422.1,INSD:EH807908.1,INSD:EG514558.1,
INSD:EH959861.1,INSD:AV821659.1,INSD:DR312606.1,
INSD:EL155018.1,INSD:EG514416.1,INSD:BP867361.2,
INSD:EH798030.1,INSD:EH984024.1,INSD:DR312611.1,
INSD:DR312613.1,INSD:DR312580.1,INSD:DR312588.1,
INSD:AV798362.1,INSD:EH956041.1,INSD:Z17740.1,
INSD:AV518046.1,INSD:DR312592.1,INSD:DR312594.1,
INSD:DR312591.1,INSD:DR312572.1,INSD:DR312596.1,
INSD:BP651788.1,INSD:DR312577.1,INSD:DR312584.1,
INSD:EH992160.1,INSD:EL152247.1,INSD:EL006320.1,
INSD:BP588938.1,INSD:DR373134.1,INSD:EL220515.1,
INSD:CB263797.1,INSD:DR312601.1,INSD:Z37220.1,
INSD:AV788449.1,INSD:EL086908.1,INSD:EH819408.1,
INSD:DR312587.1,INSD:EH974098.1,INSD:EH914047.1,
INSD:BP595349.1,INSD:DR312581.1,INSD:EL064684.1,
INSD:DR312608.1,INSD:DR312589.1,INSD:EL119493.1,
INSD:CK119599.1,INSD:EH921048.1,INSD:DR243240.1,
INSD:DR312598.1,INSD:DR312609.1,INSD:EH913274.1,
INSD:DR312604.1,INSD:DR312573.1,INSD:CK117700.1,
INSD:T75817.1,INSD:AV533661.1,INSD:DR312600.1,
INSD:DR312614.1,INSD:BP597584.1,INSD:T13941.1,
INSD:Z17741.1,INSD:DR312583.1,INSD:DR312595.1,
INSD:EG451027.1,INSD:DR312575.1,INSD:EL157037.1,
INSD:EL180990.1,INSD:EH870177.1,INSD:BP840729.1,
INSD:EL212378.1,INSD:DR312597.1,INSD:EL226656.1,
INSD:AV782178.1,INSD:DR312586.1,INSD:EL189108.1,
INSD:CD532585.1,INSD:DR312605.1,INSD:BP631916.1,
INSD:DR312602.1,INSD:BP839509.1,INSD:EL162490.1,
INSD:BP627356.1,INSD:DR312576.1,INSD:EG517400.1,
INSD:AI100708.1,INSD:EL292549.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF385694.1,INSD:AY085947.1,INSD:AF370296.1,
INSD:AY063043.1,INSD:BX819322.1"
/note="pyridoxine biosynthesis 1.1 (PDX1.1); FUNCTIONS IN:
protein heterodimerization activity; INVOLVED IN: vitamin
B6 biosynthetic process, response to absence of light;
LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 14 plant
structures; CONTAINS InterPro DOMAIN/s: Vitamin B6
biosynthesis protein (InterPro:IPR001852),
Ribulose-phosphate binding barrel (InterPro:IPR011060);
BEST Arabidopsis thaliana protein match is: Aldolase-type
TIM barrel family protein (TAIR:AT5G01410.1); Has 4179
Blast hits to 4172 proteins in 1294 species: Archae - 234;
Bacteria - 2657; Metazoa - 13; Fungi - 160; Plants - 179;
Viruses - 0; Other Eukaryotes - 936 (source: NCBI BLink)."
/db_xref="Araport:AT2G38230"
/db_xref="TAIR:AT2G38230"
BEGIN
1 MAGTGVVAVY GEGAMTETKQ KSPFSVKVGL AQMLRGGVIM DVVNAEQARI AEEAGACAVM
61 ALERVPADIR AQGGVARMSD PEMIKEIKNA VTIPVMAKAR IGHFVEAQIL EAIGVDYVDE
121 SEVLTLADED NHINKHNFKI PFVCGCRNLG EALRRIREGA AMIRTKGEAG TGNVVEAVRH
181 VRSVNGAIRL LRSMDDDEVF TYAKKIAAPY DLVVQTKELG RLPVVQFAAG GVATPADAAL
241 MMQLGCDGVF VGSGVFKSGD PVKRAKAIVQ AVTNYRDAAV LAEVSCGLGE AMVGLNLDDK
301 VERFASRSE
//