LOCUS       AEC09506.1               447 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION   CP002685-5604
PROTEIN_ID  AEC09506.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="APD1"
                     /locus_tag="AT2G38185"
                     /gene_synonym="ABERRANT POLLEN DEVELOPMENT 1"
                     /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
                     ion binding; INVOLVED IN: biological_process unknown;
                     EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4
                     anthesis, C globular stage, petal differentiation and
                     expansion stage, E expanded cotyledon stage, D bilateral
                     stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type
                     (InterPro:IPR001841); BEST Arabidopsis thaliana protein
                     match is: RING/U-box superfamily protein
                     (TAIR:AT2G38220.1)."
                     /db_xref="Araport:AT2G38185"
                     /db_xref="TAIR:AT2G38185"
     intron_pos      75:1 (1/9)
     intron_pos      111:0 (2/9)
     intron_pos      153:0 (3/9)
     intron_pos      184:1 (4/9)
     intron_pos      210:1 (5/9)
     intron_pos      244:0 (6/9)
     intron_pos      293:0 (7/9)
     intron_pos      318:1 (8/9)
     intron_pos      423:2 (9/9)
BEGIN
        1 MDSAPSPSSL DFELSPPVLV TMTSTSSSAS DNVEGADDDA NTHGIFNWRD FSSCWRVSES
       61 NLYCFSLALL IWFFASFILI ENLYGPKNVW LGPSSSILVE PSSIFVKSIK VKVLDYSEPG
      121 LQLYGFYRTP ALDCFVNWSE SRVLSISHES YKGWPYYLNS GSLLNITYTV KPQGSAVQLV
      181 VDEGHQGVPQ SVLNDPAYRY NVWSWNLIEG SGMIQLEIRK SSSYYLAVAN LKSKDVEVTT
      241 TDQVELNIDV KAVLYDTKQS FYNCNFSNGE CTFNAMSLVG NSVVVTSPAA SQGVSIEDEW
      301 YIRFSYQPRE IAYVIGTGVV ICFMLVAIQF CNRFQCSGGE GHLTEDDSAR TRLLADKDDD
      361 GSSMGSCDDS YANDDADLEE FMGNDGEASN RSRRLCAICF DVPRDCFFLP CGHSVSCYEC
      421 GTTMQEADGS CPICRRKMKK VKRIYTV
//