LOCUS       AEC09505.1               346 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION   CP002685-5607
PROTEIN_ID  AEC09505.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="APD1"
                     /locus_tag="AT2G38185"
                     /gene_synonym="ABERRANT POLLEN DEVELOPMENT 1"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES184763.1,INSD:AU226834.1,INSD:AA713167.1,
                     INSD:CB255419.1,INSD:BX835229.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX842432.1,INSD:BT009703.1"
                     /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
                     ion binding; INVOLVED IN: biological_process unknown;
                     LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant
                     structures; EXPRESSED DURING: 4 anthesis, C globular
                     stage, petal differentiation and expansion stage, E
                     expanded cotyledon stage, D bilateral stage; CONTAINS
                     InterPro DOMAIN/s: Zinc finger, RING-type
                     (InterPro:IPR001841); BEST Arabidopsis thaliana protein
                     match is: RING/U-box superfamily protein
                     (TAIR:AT2G38195.2); Has 35333 Blast hits to 34131 proteins
                     in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
                     974; Fungi - 991; Plants - 531; Viruses - 0; Other
                     Eukaryotes - 9610 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G38185"
                     /db_xref="TAIR:AT2G38185"
     intron_pos      23:2 (1/8)
     intron_pos      65:2 (2/8)
     intron_pos      89:1 (3/8)
     intron_pos      115:1 (4/8)
     intron_pos      143:0 (5/8)
     intron_pos      192:0 (6/8)
     intron_pos      217:1 (7/8)
     intron_pos      322:2 (8/8)
BEGIN
        1 MSGLDPVRQF LLNQALFLSK ALRLKCLITQ NQGFSFMGSI ELLLWIVLST GLNPECYLSH
       61 MNLTSGSLLN ITYTVKPQGS AVQLVVDEGH QGVPQSVLND PAYRYNVWSW NLIEGSGMIQ
      121 LEIRKSSSYY LAVANLKSKD VEVELNIDVK AVLYDTKQSF YNCNFSNGEC TFNAMSLVGN
      181 SVVVTSPAAS QGVSIEDEWY IRFSYQPREI AYVIGTGVVI CFMLVAIQFC NRFQCSGGEG
      241 HLTEDDSART RLLADKDDDG SSMGSCDDSY ANDDADLEEF MGNDGEASNR SRRLCAICFD
      301 VPRDCFFLPC GHSVSCYECG TTMQEADGSC PICRRKMKKV KRIYTV
//