LOCUS AEC09468.1 305 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Inositol phosphorylceramide synthase
2 protein.
ACCESSION CP002685-5558
PROTEIN_ID AEC09468.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="AtIPCS2"
/locus_tag="AT2G37940"
/gene_synonym="Arabidopsis Inositol phosphorylceramide
synthase 2"
/gene_synonym="enhancing RPW8-mediated HR-like cell death
1"
/gene_synonym="ERH1"
/gene_synonym="T8P21.15"
/gene_synonym="T8P21_15"
/inference="Similar to RNA sequence,
EST:INSD:BX837070.1,INSD:CD530479.1,INSD:EH903191.1,
INSD:EH832549.1,INSD:EL030699.1,INSD:EG467478.1,
INSD:AV828648.1,INSD:EL156228.1,INSD:BP606740.1,
INSD:EL223029.1,INSD:CB254792.1,INSD:EG467479.1,
INSD:EL077492.1,INSD:DR221976.1,INSD:BE662928.1,
INSD:DR221978.1,INSD:EH937575.1,INSD:EH919670.1,
INSD:EH886613.1,INSD:EH824118.1,INSD:BP856396.1,
INSD:BP671377.1,INSD:BP779471.1,INSD:EH827300.1,
INSD:BP785180.1,INSD:BP797837.1,INSD:DR370094.1,
INSD:EH947204.1,INSD:EL026409.1,INSD:EL137364.1,
INSD:AI998852.1,INSD:DR221977.1,INSD:EH835777.1,
INSD:AV802276.1,INSD:CD531649.1,INSD:T45834.1,
INSD:BP629546.1,INSD:BP843372.1,INSD:BP867241.1,
INSD:BP794290.1,INSD:DR221974.1,INSD:EL995671.1,
INSD:EL032197.1,INSD:DR221975.1,INSD:AV536750.1,
INSD:EL053764.1,INSD:AV816682.1,INSD:EL076522.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819278.1,INSD:AY090297.1,INSD:BX820152.1,
INSD:BX820301.1,INSD:AY058059.1,INSD:AF325083.1"
/note="Arabidopsis Inositol phosphorylceramide synthase 2
(AtIPCS2); BEST Arabidopsis thaliana protein match is:
Arabidopsis Inositol phosphorylceramide synthase 1
(TAIR:AT3G54020.1); Has 438 Blast hits to 435 proteins in
100 species: Archae - 0; Bacteria - 0; Metazoa - 250;
Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes -
85 (source: NCBI BLink)."
/db_xref="Araport:AT2G37940"
/db_xref="TAIR:AT2G37940"
intron_pos 12:0 (1/11)
intron_pos 42:0 (2/11)
intron_pos 71:0 (3/11)
intron_pos 94:0 (4/11)
intron_pos 121:0 (5/11)
intron_pos 145:0 (6/11)
intron_pos 165:1 (7/11)
intron_pos 198:2 (8/11)
intron_pos 230:2 (9/11)
intron_pos 246:1 (10/11)
intron_pos 282:0 (11/11)
BEGIN
1 MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT
61 LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI LKTKKIYTVL IWCRVLAFLV
121 ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH
181 MIFTLVFVRT YQKYGTKRFI KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL
241 DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301 TMNGA
//