LOCUS AEC09383.1 500 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-5444
PROTEIN_ID AEC09383.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G37320"
/gene_synonym="F3G5.11"
/gene_synonym="F3G5_11"
/inference="Similar to RNA sequence,
EST:INSD:EG436078.1,INSD:ES044035.1,INSD:EG429356.1,
INSD:EG429360.1,INSD:EH895771.1,INSD:BP816055.1,
INSD:ES013140.1,INSD:EG429364.1,INSD:EG429362.1,
INSD:EG429368.1,INSD:EG429367.1,INSD:EG429359.1,
INSD:EG429349.1,INSD:BP649396.1,INSD:EG445582.1,
INSD:EG436079.1,INSD:ES014955.1,INSD:EG429366.1,
INSD:EG429361.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY461658.1,INSD:AY461659.1,INSD:BT010613.1,
INSD:AK175809.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, embryo, leaf
whorl, flower, seed; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT3G24000.1); Has 40972 Blast hits to 13911
proteins in 248 species: Archae - 0; Bacteria - 4; Metazoa
- 85; Fungi - 62; Plants - 40344; Viruses - 0; Other
Eukaryotes - 477 (source: NCBI BLink)."
/db_xref="Araport:AT2G37320"
/db_xref="TAIR:AT2G37320"
BEGIN
1 MSCLRNYYCR AFGYKQSRSC YSRSLNREIA NESSEVERRA RSLRVLDIIS SKSGGVSNRQ
61 DHFGFVQEFR QTDSWRFRGQ AISEDFDLSR TKNGVSSVLE EVMLEDSSSS VKRDGWSFDA
121 YGLSSAVRSC GLNRDFRTGS GFHCLALKGG FISDVYLGSS LVVLYRDSGE VENAYKVFEE
181 MPERNVVSWT AMISGFAQEW RVDICLKLYS KMRKSTSDPN DYTFTALLSA CTGSGALGQG
241 RSVHCQTLHM GLKSYLHISN SLISMYCKCG DLKDAFRIFD QFSNKDVVSW NSMIAGYAQH
301 GLAMQAIELF ELMMPKSGTK PDAITYLGVL SSCRHAGLVK EGRKFFNLMA EHGLKPELNH
361 YSCLVDLLGR FGLLQEALEL IENMPMKPNS VIWGSLLFSC RVHGDVWTGI RAAEERLMLE
421 PDCAATHVQL ANLYASVGYW KEAATVRKLM KDKGLKTNPG CSWIEINNYV FMFKAEDGSN
481 CRMLEIVHVL HCLIDHMEFL
//