LOCUS AEC09375.1 207 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosomal protein 5B protein.
ACCESSION CP002685-5428
PROTEIN_ID AEC09375.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RPS5B"
/locus_tag="AT2G37270"
/gene_synonym="ATRPS5B"
/gene_synonym="F3G5.6"
/gene_synonym="F3G5_6"
/gene_synonym="ribosomal protein 5B"
/inference="Similar to RNA sequence,
EST:INSD:EH853197.1,INSD:EL974689.1,INSD:EL189062.1,
INSD:EL010855.1,INSD:BP661644.1,INSD:DR305406.1,
INSD:EL053524.1,INSD:DR305402.1,INSD:ES004431.1,
INSD:BP647989.1,INSD:DR305387.1,INSD:DR305386.1,
INSD:BP607158.1,INSD:ES087091.1,INSD:EL242730.1,
INSD:BP593034.1,INSD:BP847322.1,INSD:ES154944.1,
INSD:ES066118.1,INSD:BP566899.1,INSD:ES143887.1,
INSD:AV566039.1,INSD:EL033965.1,INSD:ES116286.1,
INSD:BP799650.1,INSD:DR305383.1,INSD:BP667124.1,
INSD:ES041852.1,INSD:BP858657.1,INSD:EL160001.1,
INSD:BP858864.1,INSD:DR377054.1,INSD:EL199744.1,
INSD:EL036358.1,INSD:DR305391.1,INSD:EH989556.1,
INSD:EH964739.1,INSD:ES072145.1,INSD:BP805029.1,
INSD:AA041131.1,INSD:BP824440.1,INSD:EH861724.1,
INSD:BP848523.1,INSD:BP844105.1,INSD:EL080867.1,
INSD:DR305410.1,INSD:EL200774.1,INSD:EH961620.1,
INSD:EL300416.1,INSD:DR305374.1,INSD:DR305393.1,
INSD:EL149595.1,INSD:EL968192.1,INSD:BP577364.1,
INSD:BP628400.1,INSD:BP605439.1,INSD:EL973124.1,
INSD:EH814998.1,INSD:DR305376.1,INSD:BP851226.1,
INSD:BP624657.1,INSD:DR305397.1,INSD:BP866373.2,
INSD:BP864369.1,INSD:BP655359.1,INSD:Z34551.1,
INSD:EL220019.1,INSD:ES071819.1,INSD:DR305408.1,
INSD:AV792141.1,INSD:ES207687.1,INSD:H35978.1,
INSD:ES030265.1,INSD:DR305399.1,INSD:ES164881.1,
INSD:ES124490.1,INSD:BP580276.1,INSD:ES186988.1,
INSD:EL048506.1,INSD:DR305398.1,INSD:EL968553.1,
INSD:AV554609.1,INSD:ES166772.1,INSD:AV819840.1,
INSD:BP590677.1,INSD:DR305404.1,INSD:BP630477.1,
INSD:CB254696.1,INSD:DR305388.1,INSD:DR305389.1,
INSD:BP628317.1,INSD:T88281.1,INSD:BP645707.1,
INSD:BP590858.1,INSD:BP625046.1,INSD:BP626988.1,
INSD:DR305377.1,INSD:ES142749.1,INSD:EL004816.1,
INSD:BP672130.1,INSD:DR371381.1,INSD:DR305405.1,
INSD:DR305385.1,INSD:BP624426.1,INSD:DR305394.1,
INSD:EL209012.1,INSD:EL151997.1,INSD:DR305400.1,
INSD:BP616493.1,INSD:BP577963.1,INSD:BP800616.1,
INSD:ES197851.1,INSD:ES014298.1,INSD:EH946432.1,
INSD:BP579586.1,INSD:ES172583.1,INSD:DR305403.1,
INSD:BP575412.1,INSD:BP582765.1,INSD:BP671962.1,
INSD:BP630389.1,INSD:BP839144.1,INSD:ES211041.1,
INSD:DR305401.1,INSD:ES024454.1,INSD:AA598091.1,
INSD:ES127655.1,INSD:EH941940.1,INSD:AV532091.1,
INSD:BP797161.1,INSD:EL225708.1,INSD:ES073458.1,
INSD:EL134599.1,INSD:BP860639.2,INSD:BP633470.1,
INSD:BP591782.1,INSD:AI099850.1,INSD:EH811524.1,
INSD:EL258758.1,INSD:ES047406.1,INSD:DR305395.1,
INSD:AI992481.1,INSD:BP779129.1,INSD:DR305396.1,
INSD:BP662581.1,INSD:EL031648.1,INSD:ES161514.1,
INSD:EH803686.1,INSD:CB254539.1,INSD:EH969380.1,
INSD:R84129.1,INSD:DR305384.1,INSD:BP634728.1,
INSD:ES016193.1,INSD:ES028947.1,INSD:BP633796.1,
INSD:DR305380.1,INSD:EL968354.1,INSD:DR305390.1,
INSD:BP631914.1,INSD:BP803243.1,INSD:DR305392.1,
INSD:ES010906.1,INSD:DR305375.1,INSD:BE038029.1,
INSD:BP666787.1,INSD:BP576131.1,INSD:ES148627.1,
INSD:ES107848.1,INSD:EL048981.1,INSD:AI997468.1,
INSD:BP849827.1,INSD:ES209013.1,INSD:ES090906.1,
INSD:EL138481.1,INSD:EL301941.1,INSD:BP801613.1,
INSD:CF652110.1,INSD:EH845029.1,INSD:DR305382.1,
INSD:BP625911.1,INSD:ES150518.1,INSD:EL239255.1,
INSD:DR305379.1,INSD:EL241168.1,INSD:EL322007.1,
INSD:EL315609.1,INSD:R30035.1,INSD:EL253456.1,
INSD:EL998344.1,INSD:DR305372.1,INSD:EL084369.1,
INSD:BP803098.1,INSD:DR305373.1,INSD:ES142932.1,
INSD:DR305381.1,INSD:AI099638.1,INSD:ES106585.1,
INSD:EL052423.1,INSD:EL148168.1,INSD:EL303418.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY081669.1,INSD:AY059849.1,INSD:BX820728.1,
INSD:AY088613.1"
/note="ribosomal protein 5B (RPS5B); FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: in 7 components; EXPRESSED IN:
fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING:
seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal
protein S7, conserved site (InterPro:IPR020606), Ribosomal
protein S7, eukaryotic/archaeal (InterPro:IPR005716),
Ribosomal protein S7 (InterPro:IPR000235); BEST
Arabidopsis thaliana protein match is: ribosomal protein
5A (TAIR:AT3G11940.2); Has 8721 Blast hits to 8721
proteins in 3528 species: Archae - 243; Bacteria - 4624;
Metazoa - 988; Fungi - 182; Plants - 1133; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink)."
/db_xref="Araport:AT2G37270"
/db_xref="TAIR:AT2G37270"
intron_pos 32:0 (1/3)
intron_pos 122:2 (2/3)
intron_pos 190:2 (3/3)
BEGIN
1 MAASAEIDAE IQQQLTNEVK LFNRWSFDDV SVTDISLVDY IGVQPSKHAT FVPHTAGRYS
61 VKRFRKAQCP IVERLTNSLM MHGRNNGKKL MAVRIVKHAM EIIHLLSDLN PIQVIIDAIV
121 NSGPREDATR IGSAGVVRRQ AVDISPLRRV NQAIFLLTTG AREAAFRNIK TIAECLADEL
181 INAAKGSSNS YAIKKKDEIE RVAKANR
//