LOCUS AEC09366.1 180 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Uncharacterized protein family (UPF0497)
protein.
ACCESSION CP002685-5418
PROTEIN_ID AEC09366.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G37200"
/gene_synonym="CASP-like protein 5A1"
/gene_synonym="CASPL5A1"
/gene_synonym="T2N18.4"
/gene_synonym="T2N18_4"
/inference="Similar to RNA sequence,
EST:INSD:BP622303.1,INSD:ES130799.1,INSD:ES076287.1,
INSD:DR372370.1,INSD:EL083336.1,INSD:DR291507.1,
INSD:EL972828.1,INSD:ES150797.1,INSD:EL224481.1,
INSD:DR291500.1,INSD:ES024359.1,INSD:EH875557.1,
INSD:ES033179.1,INSD:DR291503.1,INSD:EH835885.1,
INSD:DR291502.1,INSD:ES004749.1,INSD:BP672038.1,
INSD:DR291506.1,INSD:ES004674.1,INSD:DR291508.1,
INSD:DR291504.1,INSD:EH927564.1,INSD:ES215432.1,
INSD:DR291501.1,INSD:BP623553.1,INSD:EL267933.1,
INSD:EL327558.1,INSD:BP626448.1,INSD:ES115912.1,
INSD:AU228494.1,INSD:BP643794.1,INSD:EL133004.1,
INSD:ES105119.1,INSD:DR291505.1,INSD:EL132422.1,
INSD:ES009948.1,INSD:ES161561.1,INSD:EG451387.1,
INSD:ES140991.1,INSD:ES042379.1,INSD:AU237429.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821221.1,INSD:BT010678.1,INSD:BT010966.1,
INSD:AK228932.1"
/note="Uncharacterised protein family (UPF0497); CONTAINS
InterPro DOMAIN/s: Uncharacterised protein family UPF0497,
trans-membrane plant (InterPro:IPR006702); BEST
Arabidopsis thaliana protein match is: Uncharacterised
protein family (UPF0497) (TAIR:AT2G28370.1); Has 205 Blast
hits to 205 proteins in 15 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G37200"
/db_xref="TAIR:AT2G37200"
intron_pos 74:2 (1/2)
intron_pos 119:0 (2/2)
BEGIN
1 MMNVSRPAIH PVDALPVAPT AGAIDRPPVR MKDVQGMPGT TGGLILRLSQ FVPALISVSV
61 MVTTSDFRSA TAFCCLVLAV SLQSLWSLSL FIIDAYALLV RRSLRNHSVV QCFTIGDGVT
121 STLTFAAASA SAGITVLIND LGQCNVNHCT RFETATAMAF ISWFAVSPSF ILNFWSLATH
//