LOCUS AEC09350.1 351 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleotide-diphospho-sugar transferases
superfamily protein protein.
ACCESSION CP002685-5384
PROTEIN_ID AEC09350.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="IRX9"
/locus_tag="AT2G37090"
/gene_synonym="IRREGULAR XYLEM 9"
/gene_synonym="T2N18.15"
/gene_synonym="T2N18_15"
/inference="Similar to RNA sequence,
EST:INSD:AV565149.1,INSD:EH909455.1,INSD:AA395064.1,
INSD:BE520680.1,INSD:AV561005.1,INSD:AV564152.1,
INSD:EH819610.1,INSD:AV562912.1,INSD:AA650986.1,
INSD:AI994078.1,INSD:AV565161.1,INSD:AI993027.1,
INSD:AV559190.1,INSD:R30453.1,INSD:AV558546.1,
INSD:T42465.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT015044.1,INSD:BT015838.1"
/note="IRREGULAR XYLEM 9 (IRX9); CONTAINS InterPro
DOMAIN/s: Glycosyl transferase, family 43
(InterPro:IPR005027); BEST Arabidopsis thaliana protein
match is: Nucleotide-diphospho-sugar transferases
superfamily protein (TAIR:AT1G27600.2); Has 591 Blast hits
to 584 proteins in 85 species: Archae - 0; Bacteria - 0;
Metazoa - 323; Fungi - 0; Plants - 254; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink)."
/db_xref="Araport:AT2G37090"
/db_xref="TAIR:AT2G37090"
intron_pos 232:2 (1/2)
intron_pos 309:0 (2/2)
BEGIN
1 MGSLERSKKK AQVWKKAVIH FSLCFVMGFF TGFAPAGKAS FFSNFETTSY TSTKSPIPPQ
61 PFENATYTQH SLLNRTLINS QSQAPAPAES REAEGETRSL SEKEDENQVK VTPRGLVIVV
121 TPIITKDRYK NVLLRRMANT LRLVPPPLLW IVVEKHSDGE EKSSSTMLRK TGIMYRRIVF
181 KEDFTSLESE LDHQRNLALR HIEHHKLSGI VHFAGLNNIY DLDFFVKIRD IEVFGTWPMA
241 LLSANRKRVV VEGPVCESSQ VLGWHLRKIN NETETKPPIH ISSFAFNSSI LWDPERWGRP
301 SSVEGTKQDS IKYVKQVVLE DDTKLKGLPA QDCSKIMLWR LKFPTRTRLS T
//