LOCUS AEC09346.1 173 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear factor Y, subunit B8 protein.
ACCESSION CP002685-5377
PROTEIN_ID AEC09346.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NF-YB8"
/locus_tag="AT2G37060"
/gene_synonym="''nuclear factor Y"
/gene_synonym="nuclear factor Y"
/gene_synonym="subunit B8"
/gene_synonym="subunit B8''"
/gene_synonym="T2N18.18"
/gene_synonym="T2N18_18"
/inference="Similar to RNA sequence,
EST:INSD:EL144176.1,INSD:EH815372.1,INSD:ES103340.1,
INSD:ES185160.1,INSD:ES019380.1,INSD:ES146133.1,
INSD:EL174326.1,INSD:ES165588.1,INSD:EL032703.1"
/note="''nuclear factor Y, subunit B8'' (NF-YB8);
FUNCTIONS IN: sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent; LOCATED IN: nucleus, intracellular;
EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED
DURING: M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: Transcription factor, CBFA/NFYB, DNA
topoisomerase (InterPro:IPR003957), Transcription factor
CBF/NF-Y/archaeal histone (InterPro:IPR003958),
Histone-fold (InterPro:IPR009072), Transcription factor,
NFYB/HAP3, conserved site (InterPro:IPR003956); BEST
Arabidopsis thaliana protein match is: nuclear factor Y,
subunit B10 (TAIR:AT3G53340.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G37060"
/db_xref="TAIR:AT2G37060"
intron_pos 76:2 (1/5)
intron_pos 120:0 (2/5)
intron_pos 122:0 (3/5)
intron_pos 147:0 (4/5)
intron_pos 161:0 (5/5)
BEGIN
1 MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA NGKIAKDAKE
61 IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT LGFEDYMEPL KVYLMRYREM
121 EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL AHQGPYGNSQ AQQHMMVPMP GTD
//