LOCUS AEC09337.1 410 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRF-like 8 protein.
ACCESSION CP002685-5367
PROTEIN_ID AEC09337.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TRFL8"
/locus_tag="AT2G37025"
/gene_synonym="TRF-like 8"
/inference="Similar to RNA sequence,
EST:INSD:BP861638.1,INSD:AU229309.1,INSD:EL059917.1,
INSD:AV559981.1,INSD:AV564615.1"
/inference="similar to RNA sequence, mRNA:INSD:AK230448.1"
/note="TRF-like 8 (TRFL8); FUNCTIONS IN: DNA binding;
INVOLVED IN: regulation of transcription; CONTAINS
InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
Homeodomain-like (InterPro:IPR009057), HTH transcriptional
regulator, Myb-type, DNA-binding (InterPro:IPR017930),
Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
thaliana protein match is: TRF-like 6 (TAIR:AT1G72650.2);
Has 426 Blast hits to 414 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 30; Fungi - 25; Plants - 327;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink)."
/db_xref="Araport:AT2G37025"
/db_xref="TAIR:AT2G37025"
intron_pos 24:0 (1/8)
intron_pos 86:1 (2/8)
intron_pos 104:0 (3/8)
intron_pos 134:1 (4/8)
intron_pos 228:2 (5/8)
intron_pos 259:0 (6/8)
intron_pos 336:0 (7/8)
intron_pos 355:0 (8/8)
BEGIN
1 MGPFGMETTP GFPDTFAGFK SASVDENLGH SMEDKMSDMK HFLMDPHHDN TAVDSFLGLG
61 MENMGLTSKM EEFSHGFDVS FLPDYGGVNT FSTQDVEAGL KFEILDGILD GVDEVEDIYA
121 SHELSSIVNH FPPETEVKKN ELEGDPYGLM NFSSESYSPG ISGSIGLAEW SKETVPYAES
181 QIVSSEKVKD SWDTNESEDD KKPLSTFIGS WIKRKNRKQK LLNTACSRLD SSRERKSCES
241 YDFRPRKGPM KKYIHTSMEK TFSDDQLTLS ESEDDISVTK TSRTKSDRRK NQRIWTLDEV
301 MNLVDGISHF GVGKWTDIKN HFFHYAAHRK PVDIRDKWRN LLKASYNEKH NDGQAEEKRK
361 SVARSIPKDI LHRVRELASL HPYPFSKSPC IVHDSSRSRS TSKNKKKKSG
//