LOCUS AEC09335.1 308 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Translin family protein protein.
ACCESSION CP002685-5365
PROTEIN_ID AEC09335.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G37020"
/gene_synonym="T1J8.20"
/gene_synonym="T1J8_20"
/inference="Similar to RNA sequence,
EST:INSD:BP837652.1,INSD:DR246685.1,INSD:EL055051.1,
INSD:DR246690.1,INSD:BP655377.1,INSD:DR246688.1,
INSD:DR246686.1,INSD:DR377126.1,INSD:AV819831.1,
INSD:DR246692.1,INSD:AV522536.1,INSD:EH846874.1,
INSD:BP783822.1,INSD:EG486672.1,INSD:AV564027.1,
INSD:BP779307.1,INSD:DR246693.1,INSD:BP630577.1,
INSD:DR246689.1,INSD:DR246683.1,INSD:BP818597.1,
INSD:DR246684.1,INSD:BP835840.1,INSD:BP658279.1,
INSD:BP831285.1,INSD:DR246691.1,INSD:BP824518.1,
INSD:ES163408.1,INSD:BP786456.1,INSD:ES067265.1,
INSD:EG486671.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY042792.1,INSD:AY064692.1"
/note="Translin family protein; FUNCTIONS IN:
sequence-specific DNA binding, DNA binding; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Translin,
C-terminal (InterPro:IPR016069), Translin
(InterPro:IPR002848), Translin, N-terminal
(InterPro:IPR016068); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G37020"
/db_xref="TAIR:AT2G37020"
intron_pos 132:1 (1/6)
intron_pos 164:2 (2/6)
intron_pos 203:1 (3/6)
intron_pos 218:1 (4/6)
intron_pos 227:0 (5/6)
intron_pos 272:1 (6/6)
BEGIN
1 MNSAFRNVHI TASRLINPKP FSSSILHFLP LCSGDASPRR SNPLRHRNSV SPSSSFPFCS
61 TSSFSSFYIP MAGGDGQVSH SLEKQFESFR VQLEESAALR EQIRAVVMEI ESATRLIQAN
121 LLLVHQSRPI PEVIEKAKEK IVDLKQYYGR LAEILEECPG QYYRYHGDWR SETQAVVSQL
181 AFMHWLETGT LLVHTEAEEK LGLNSLEFGL ETEDYLTGIC FMSNDLPRYV VNRVTAGDYD
241 CPRKVMNFLT DLHAAFRMLN LRNDFLRKKF DSMKYDLRRV EEVYYDVKIR GLISGGDPPG
301 VQAVQGQS
//