LOCUS AEC09323.1 198 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (C2H2 type) family protein
protein.
ACCESSION CP002685-5349
PROTEIN_ID AEC09323.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G36930"
/gene_synonym="T1J8.11"
/gene_synonym="T1J8_11"
/inference="Similar to RNA sequence,
EST:INSD:EL252926.1,INSD:BP624370.1,INSD:ES016064.1,
INSD:DR186287.1,INSD:ES048140.1,INSD:BP615205.1,
INSD:BP866158.1,INSD:EL036459.1,INSD:DR186289.1,
INSD:BP814287.1,INSD:EL037083.1,INSD:EH915420.1,
INSD:BP579471.1,INSD:ES207625.1,INSD:BE039431.1,
INSD:EL982658.1,INSD:BP660304.1,INSD:EG516803.1,
INSD:T76419.1,INSD:ES104769.1,INSD:DR186288.1,
INSD:ES080374.1,INSD:CK119929.1,INSD:BP654129.1,
INSD:BP854747.1,INSD:ES093412.1,INSD:ES116795.1,
INSD:BP828492.1,INSD:BP825294.1,INSD:EH958682.1,
INSD:ES141966.1,INSD:BP619924.1,INSD:BP815476.1,
INSD:BP647529.1,INSD:ES015383.1,INSD:BE523860.1,
INSD:EG516804.1,INSD:BP595792.1,INSD:ES133045.1,
INSD:CB252894.1,INSD:BP639970.1,INSD:CB252621.1,
INSD:AV820672.1,INSD:CB256571.1,INSD:EL049910.1,
INSD:EL181840.1,INSD:BP580588.1,INSD:BP646853.1,
INSD:EH992004.1,INSD:BP629867.1,INSD:AA394612.1,
INSD:BP627575.1,INSD:ES048455.1,INSD:DR186284.1,
INSD:ES116557.1,INSD:DR186285.1,INSD:ES154627.1,
INSD:BP803748.1,INSD:DR376527.1,INSD:AV823431.1,
INSD:BP822893.1,INSD:ES043957.1,INSD:DR186286.1,
INSD:DR186282.1,INSD:BP858051.1,INSD:ES061505.1,
INSD:AV784393.1,INSD:BP574185.1,INSD:BP629927.1,
INSD:BP667264.1,INSD:EL997478.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY045831.1,INSD:AY091369.1"
/note="zinc finger (C2H2 type) family protein; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: intracellular;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
C2H2-like (InterPro:IPR015880), Zinc finger, U1-type
(InterPro:IPR003604), Zinc finger, C2H2-type
(InterPro:IPR007087), Zinc finger, double-stranded RNA
binding (InterPro:IPR022755); Has 726 Blast hits to 418
proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa
- 301; Fungi - 225; Plants - 112; Viruses - 0; Other
Eukaryotes - 88 (source: NCBI BLink)."
/db_xref="Araport:AT2G36930"
/db_xref="TAIR:AT2G36930"
intron_pos 64:2 (1/4)
intron_pos 85:2 (2/4)
intron_pos 144:2 (3/4)
intron_pos 165:2 (4/4)
BEGIN
1 MGRCPTRKVK KRRLSHKTAR RDKFEVKGDD LVYTELRKPE TEIKPLQLDE DLPGMGQFYC
61 LHCDRYFSNV SVRDDHFKTK KHKKRVNMMM GQAPHSQLDA DLAGGMGMPD NGPKLMSNLV
121 FTELRKPETE DLPGMGQFNC LLCHRNFSNA SVMDYHFKTK KHKKRVKKIE RPAPHSQLDA
181 DLAGGMGMPD NGPKLMSA
//