LOCUS AEC09292.1 501 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-5314
PROTEIN_ID AEC09292.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G36730"
/gene_synonym="F13K3.13"
/gene_synonym="F13K3_13"
/inference="Similar to RNA sequence,
EST:INSD:ES036286.1,INSD:EL984355.1,INSD:EL988763.1,
INSD:EL999291.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT4G21065.1); Has 32545 Blast hits to 13146
proteins in 206 species: Archae - 0; Bacteria - 9; Metazoa
- 61; Fungi - 42; Plants - 32037; Viruses - 0; Other
Eukaryotes - 396 (source: NCBI BLink)."
/db_xref="Araport:AT2G36730"
/db_xref="TAIR:AT2G36730"
BEGIN
1 MIWSSDSCFK SRKHQCLIFL KLCSSIKHLL QIHGQIHLSS LQNDSFIISE LVRVSSLSLA
61 KDLAFARTLL LHSSDSTPST WNMLSRGYSS SDSPVESIWV YSEMKRRGIK PNKLTFPFLL
121 KACASFLGLT AGRQIQVEVL KHGFDFDVYV GNNLIHLYGT CKKTSDARKV FDEMTERNVV
181 SWNSIMTALV ENGKLNLVFE CFCEMIGKRF CPDETTMVVL LSACGGNLSL GKLVHSQVMV
241 RELELNCRLG TALVDMYAKS GGLEYARLVF ERMVDKNVWT WSAMIVGLAQ YGFAEEALQL
301 FSKMMKESSV RPNYVTFLGV LCACSHTGLV DDGYKYFHEM EKIHKIKPMM IHYGAMVDIL
361 GRAGRLNEAY DFIKKMPFEP DAVVWRTLLS ACSIHHDEDD EGIGEKVKKR LIELEPKRSG
421 NLVIVANRFA EARMWAEAAE VRRVMKETKM KKIAGESCLE LGGSFHRFFS GYDPRSEYVS
481 IYELLDLFKF QLTCDYRLVS E
//