LOCUS AEC09234.1 283 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Uncharacterized protein family (UPF0497)
protein.
ACCESSION CP002685-5250
PROTEIN_ID AEC09234.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G36330"
/gene_synonym="CASP-like protein 4A3"
/gene_synonym="CASPL4A3"
/gene_synonym="F2H17.6"
/gene_synonym="F2H17_6"
/inference="Similar to RNA sequence,
EST:INSD:ES201696.1,INSD:DR378482.1,INSD:EH935722.1,
INSD:AU227281.1,INSD:AV542687.1,INSD:DR270693.1,
INSD:DR270691.1,INSD:EL090934.1,INSD:DR270690.1,
INSD:AU236372.1,INSD:EL043009.1,INSD:EL224748.1,
INSD:ES160836.1,INSD:BP805202.1,INSD:DR270692.1,
INSD:BE039394.1,INSD:ES189005.1,INSD:ES166666.1"
/inference="similar to RNA sequence, mRNA:INSD:BT002934.1"
/note="Uncharacterised protein family (UPF0497); FUNCTIONS
IN: molecular_function unknown; LOCATED IN: plasma
membrane, membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0497,
trans-membrane plant (InterPro:IPR006702); BEST
Arabidopsis thaliana protein match is: Uncharacterised
protein family (UPF0497) (TAIR:AT5G62820.1); Has 241 Blast
hits to 239 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 6; Fungi - 1; Plants - 232; Viruses - 0;
Other Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="Araport:AT2G36330"
/db_xref="TAIR:AT2G36330"
intron_pos 174:2 (1/2)
intron_pos 220:0 (2/2)
BEGIN
1 MRSPAKTMPS MSPSSVSTEK SPPPSDTSMA IVAFDNSTTH FSSSPSPPHS LDHSSESEKE
61 DAKSKPESRR NKNPGKVEET PSPIVVVHNH NRSVKEVVPT RKSARVGSGR SSGQRSGAVS
121 AILRRSRREE VVKFSALGFR LSEVVLALIS FSIMAADKTK GWSGDSFDRY KEYRFCLSVN
181 VVAFVYSSFQ ACDLAYHLVK EKHLISHHLR PLFEFIIDQV LAYLLMSAST AAVTRVDDWV
241 SNWGKDEFTE MASASIAMSF LAFLAFAFSS LISGYNLFNQ GSL
//