LOCUS AEC09220.1 497 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pentatricopeptide (PPR) repeat-containing
protein protein.
ACCESSION CP002685-5231
PROTEIN_ID AEC09220.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G36240"
/gene_synonym="F2H17.15"
/gene_synonym="F2H17_15"
/inference="Similar to RNA sequence,
EST:INSD:EH991290.1,INSD:ES186242.1,INSD:EH797376.1,
INSD:EL216308.1,INSD:EH814271.1,INSD:AI993619.1,
INSD:EH849772.1,INSD:ES177790.1,INSD:EL108219.1,
INSD:EH839978.1,INSD:EL039397.1,INSD:DR297207.1,
INSD:DR297209.1,INSD:DR378687.1,INSD:ES117147.1,
INSD:BP561601.1,INSD:EH882288.1,INSD:EL330300.1,
INSD:ES100611.1,INSD:EL136733.1,INSD:DR297208.1,
INSD:DR297211.1,INSD:DR297210.1,INSD:N95908.1,
INSD:ES129096.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820210.1,INSD:BT014893.1,INSD:AK226848.1,
INSD:BT015026.1"
/note="pentatricopeptide (PPR) repeat-containing protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR-like) superfamily
protein (TAIR:AT1G09900.1); Has 43076 Blast hits to 12816
proteins in 267 species: Archae - 3; Bacteria - 25;
Metazoa - 283; Fungi - 440; Plants - 41291; Viruses - 2;
Other Eukaryotes - 1032 (source: NCBI BLink)."
/db_xref="Araport:AT2G36240"
/db_xref="TAIR:AT2G36240"
BEGIN
1 MRWNKKNVIS LVSKSHHLPA PITPPLPEIY RIPNPPPKLP EISIPPTLTL SPSPKHSNFV
61 NFLENNLPHH QTLTPQTLLG FLRSKIRNHP LYAHYDFAVF NWAATLDTFR HDHDSFLWMS
121 RSLAATHRFD DLYRLLSFVA ANPCPCSSGI FSCPELEPIF RSAIDAYCRA RKMDYALLAF
181 DTMKRLIDGK PNVGVYNTVV NGYVKSGDMD KALRFYQRMG KERAKPDVCT FNILINGYCR
241 SSKFDLALDL FREMKEKGCE PNVVSFNTLI RGFLSSGKIE EGVKMAYEMI ELGCRFSEAT
301 CEILVDGLCR EGRVDDACGL VLDLLNKRVL PSEFDYGSLV EKLCGENKAV RAMEMMEELW
361 KKGQTPCFIA CTTLVEGLRK SGRTEKASGF MEKMMNAGIL PDSVTFNLLL RDLCSSDHST
421 DANRLRLLAS SKGYEPDETT YHVLVSGFTK EGRRKEGEVL VNEMLDKDML PDIFTYNRLM
481 DGLSCTGKFS RKQVRML
//