LOCUS AEC09219.1 304 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Aldolase-type TIM barrel family protein
protein.
ACCESSION CP002685-5230
PROTEIN_ID AEC09219.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="APG10"
/locus_tag="AT2G36230"
/gene_synonym="ALBINO AND PALE GREEN 10"
/gene_synonym="BBM II ISOMERASE"
/gene_synonym="F2H17.16"
/gene_synonym="F2H17_16"
/gene_synonym="HISN3"
/gene_synonym="PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE
CARBOXAMIDE RIBOTIDE ISOMERASE"
/inference="Similar to RNA sequence,
EST:INSD:AV790527.1,INSD:EH886485.1,INSD:ES102264.1,
INSD:EL275632.1,INSD:EH882081.1,INSD:EL081028.1,
INSD:EH933758.1,INSD:BP627942.1,INSD:EL088823.1,
INSD:EH814535.1,INSD:EL986708.1,INSD:EL134623.1,
INSD:BP618346.1,INSD:EH854281.1,INSD:EH836109.1,
INSD:ES012472.1,INSD:BP606318.1,INSD:EG456371.1,
INSD:AU230852.1,INSD:ES201336.1,INSD:AV825213.1,
INSD:EL137230.1,INSD:BP630659.1,INSD:EL305055.1,
INSD:EL058688.1,INSD:EL107812.1,INSD:BP613466.1,
INSD:DR370440.1,INSD:ES166103.1,INSD:DR309453.1,
INSD:BP616486.1,INSD:EL033344.1,INSD:EH934874.1,
INSD:AI100670.1,INSD:EL984217.1,INSD:EL277320.1,
INSD:EL333980.1,INSD:BP624633.1,INSD:BP824759.1,
INSD:EH844349.1,INSD:BP614687.1,INSD:BP638413.1,
INSD:ES006280.1,INSD:BP620743.1,INSD:AV556286.1,
INSD:ES082894.1,INSD:AU239532.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT002552.1,INSD:AY089074.1,INSD:AB006139.1,
INSD:AY140058.1,INSD:AK118659.1"
/note="ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN:
1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase activity; INVOLVED IN: histidine
biosynthetic process; LOCATED IN: chloroplast; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM
barrel (InterPro:IPR013785), Ribulose-phosphate binding
barrel (InterPro:IPR011060), Histidine biosynthesis
(InterPro:IPR006062),
Phosphoribosylformimino-5-aminoimidazole carboxamide
ribotide isomerase, eukaryotic (InterPro:IPR011858); Has
5178 Blast hits to 5176 proteins in 1344 species: Archae -
226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants -
59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI
BLink)."
/db_xref="Araport:AT2G36230"
/db_xref="TAIR:AT2G36230"
intron_pos 55:0 (1/6)
intron_pos 124:1 (2/6)
intron_pos 153:0 (3/6)
intron_pos 187:0 (4/6)
intron_pos 231:2 (5/6)
intron_pos 248:0 (6/6)
BEGIN
1 MRTLSSQLYS NGGLTWFQKK NQSSLFIKHL RVSKPSRVQL ISAVQFRPCI DIHKGKVKQI
61 VGSTLRDLKE DGSVLVTNFE SDKSAEEYAK MYKEDGLTGG HVIMLGADPL SQAAAIGALH
121 AYPGGLQVGG GINSENCMSY IEEGASHVIV TSYVFNNGKI DLERLKDIVS IVGKQRLILD
181 LSCRKKDGRY AIVTDRWQKF SDVILDEKSL EFLGGFSDEF LVHGVDVEGK KLGIDEELVA
241 LLGNYSPIPV TYAGGVTVMD DVERIKDAGK GRVDVTVGSA LDIFGGNLPY KDVVAWHHKQ
301 HSLH
//