LOCUS AEC09185.1 227 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Late embryogenesis abundant (LEA)
hydroxyproline-rich glycoprotein family protein.
ACCESSION CP002685-5195
PROTEIN_ID AEC09185.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="YLS9"
/locus_tag="AT2G35980"
/gene_synonym="ARABIDOPSIS NDR1/HIN1-LIKE 10"
/gene_synonym="ATNHL10"
/gene_synonym="F11F19.11"
/gene_synonym="F11F19_11"
/gene_synonym="NDR1/HIN1-LIKE"
/gene_synonym="NHL10"
/gene_synonym="YELLOW-LEAF-SPECIFIC GENE 9"
/inference="Similar to RNA sequence,
EST:INSD:T88193.1,INSD:T76823.1,INSD:CB185745.2,
INSD:DR291712.1,INSD:BP574127.1,INSD:CB185792.2,
INSD:CB252536.1,INSD:T76115.1,INSD:AV537189.1,
INSD:CB185796.1,INSD:BP798447.1,INSD:DR374089.1,
INSD:AU236308.1,INSD:AU227192.1,INSD:CB253600.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY086633.1,INSD:AB047812.1,INSD:BT004400.1,
INSD:BT002875.1"
/note="YELLOW-LEAF-SPECIFIC GENE 9 (YLS9); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: defense response
to virus, leaf senescence, response to other organism;
LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage,
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Late embryogenesis abundant protein,
group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana
protein match is: NDR1/HIN1-like 2 (TAIR:AT3G11650.1); Has
1046 Blast hits to 1046 proteins in 28 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1046;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G35980"
/db_xref="TAIR:AT2G35980"
BEGIN
1 MAAEQPLNGA FYGPSVPPPA PKGYYRRGHG RGCGCCLLSL FVKVIISLIV ILGVAALIFW
61 LIVRPRAIKF HVTDASLTRF DHTSPDNILR YNLALTVPVR NPNKRIGLYY DRIEAHAYYE
121 GKRFSTITLT PFYQGHKNTT VLTPTFQGQN LVIFNAGQSR TLNAERISGV YNIEIKFRLR
181 VRFKLGDLKF RRIKPKVDCD DLRLPLSTSN GTTTTSTVFP IKCDFDF
//