LOCUS AEC09114.1 387 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana shikimate kinase like 2 protein.
ACCESSION CP002685-5096
PROTEIN_ID AEC09114.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SKL2"
/locus_tag="AT2G35500"
/gene_synonym="shikimate kinase like 2"
/gene_synonym="shikimate kinase-like 2"
/gene_synonym="T32F12.12"
/gene_synonym="T32F12_12"
/inference="Similar to RNA sequence,
EST:INSD:DR232365.1,INSD:DR232384.1,INSD:BP851717.1,
INSD:EL103967.1,INSD:EH863623.1,INSD:DR232383.1,
INSD:DR232370.1,INSD:BP855521.1,INSD:EL274862.1,
INSD:EL126523.1,INSD:DR232374.1,INSD:AV560997.1,
INSD:AV441488.1,INSD:EL308769.1,INSD:DR232379.1,
INSD:AV526865.1,INSD:DR232372.1,INSD:EL067559.1,
INSD:AV522375.1,INSD:EL163472.1,INSD:DR232381.1,
INSD:EH846531.1,INSD:DR232382.1,INSD:BP561285.2,
INSD:DR232377.1,INSD:DR232366.1,INSD:DR372716.1,
INSD:EL141112.1,INSD:DR232364.1,INSD:AV555782.1,
INSD:EH892808.1,INSD:EL104903.1,INSD:DR232363.1,
INSD:DR232362.1,INSD:DR232368.1,INSD:EH825752.1,
INSD:EH874587.1,INSD:EL228225.1,INSD:EH987553.1,
INSD:DR232367.1,INSD:EL057887.1,INSD:BP830398.1,
INSD:BP622797.1,INSD:EH834813.1,INSD:AV787415.1,
INSD:EH812076.1,INSD:BP806452.1,INSD:EL016916.1,
INSD:EL050196.1,INSD:DR232375.1,INSD:EH812610.1,
INSD:EH861262.1,INSD:DR232373.1,INSD:AV520524.1,
INSD:EL009482.1,INSD:BP666234.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF412061.1,INSD:AY074560.1"
/note="shikimate kinase like 2 (SKL2); FUNCTIONS IN:
shikimate kinase activity, ATP binding; INVOLVED IN:
aromatic amino acid family biosynthetic process; LOCATED
IN: chloroplast; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate
kinase (InterPro:IPR000623), HSP20-like chaperone
(InterPro:IPR008978), CS domain (InterPro:IPR017447); Has
380 Blast hits to 380 proteins in 88 species: Archae - 0;
Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141;
Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink)."
/db_xref="Araport:AT2G35500"
/db_xref="TAIR:AT2G35500"
intron_pos 82:0 (1/7)
intron_pos 145:2 (2/7)
intron_pos 210:2 (3/7)
intron_pos 231:1 (4/7)
intron_pos 253:2 (5/7)
intron_pos 293:1 (6/7)
intron_pos 352:1 (7/7)
BEGIN
1 MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD
61 RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI LSPKDISVDA DGTSLAVKEK
121 RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM
181 QLLKGASIYI VGDSTEINQK VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV
241 AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301 ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL
361 GCRGDWPNIK PPGWDPSSDT GPHPQFT
//