LOCUS AEC09096.1 1044 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana helicase domain-containing protein protein.
ACCESSION CP002685-5072
PROTEIN_ID AEC09096.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="MEE29"
/locus_tag="AT2G35340"
/gene_synonym="maternal effect embryo arrest 29"
/gene_synonym="T32F12.28"
/gene_synonym="T32F12_28"
/inference="Similar to RNA sequence,
EST:INSD:ES184816.1,INSD:ES112686.1,INSD:ES164152.1,
INSD:EG465393.1,INSD:EH861728.1,INSD:ES109118.1,
INSD:ES149395.1"
/inference="similar to RNA sequence, mRNA:INSD:AK226760.1"
/note="maternal effect embryo arrest 29 (MEE29); FUNCTIONS
IN: helicase activity, ATP-dependent RNA helicase
activity, ATP binding, ATP-dependent helicase activity,
nucleic acid binding; INVOLVED IN: embryo development
ending in seed dormancy; LOCATED IN: endomembrane system;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Helicase-associated domain (InterPro:IPR007502), DNA/RNA
helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), Domain of unknown function DUF1605
(InterPro:IPR011709), DNA/RNA helicase, ATP-dependent,
DEAH-box type, conserved site (InterPro:IPR002464),
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021); BEST Arabidopsis thaliana protein
match is: RNA helicase family protein (TAIR:AT1G32490.1);
Has 27494 Blast hits to 21402 proteins in 1991 species:
Archae - 43; Bacteria - 4684; Metazoa - 8996; Fungi -
2538; Plants - 1485; Viruses - 1677; Other Eukaryotes -
8071 (source: NCBI BLink)."
/db_xref="Araport:AT2G35340"
/db_xref="TAIR:AT2G35340"
intron_pos 33:1 (1/26)
intron_pos 77:0 (2/26)
intron_pos 141:0 (3/26)
intron_pos 165:0 (4/26)
intron_pos 194:0 (5/26)
intron_pos 205:1 (6/26)
intron_pos 223:2 (7/26)
intron_pos 243:2 (8/26)
intron_pos 267:2 (9/26)
intron_pos 289:0 (10/26)
intron_pos 315:2 (11/26)
intron_pos 338:1 (12/26)
intron_pos 356:2 (13/26)
intron_pos 376:0 (14/26)
intron_pos 399:0 (15/26)
intron_pos 422:0 (16/26)
intron_pos 452:0 (17/26)
intron_pos 481:0 (18/26)
intron_pos 519:2 (19/26)
intron_pos 542:0 (20/26)
intron_pos 889:0 (21/26)
intron_pos 910:0 (22/26)
intron_pos 951:1 (23/26)
intron_pos 985:0 (24/26)
intron_pos 1006:0 (25/26)
intron_pos 1030:1 (26/26)
BEGIN
1 MGSNDLNTWV SDKLMVLLGF SQTAVVQYLI AMAKQSKSPG ELVRELVECG FSLSGDTRAF
61 AEEIYARAPR KTPGVNLYQQ QEAEAAMLLK KQKTFSLLEA DHDEDENNVK KQSASKTGKS
121 DKGQKRFRKK SEQLEDDDDE VVIVREDKRN VRRKVSEDED DGTESEEERL RDQREREELE
181 QHLRERDTAR TRKLTEPKMS KKEQEEFVRR DSAVDKGDIE SLRKFSWQEY MKKRKQKKVL
241 ELKDDIEDEP YLFGDEKLTE REIREFRYKR EIYELIKKST QEEDNVGEYR MPDAYDQQGS
301 VDQEKRFAVS VQRYRDMGSA EKMNPFAEQE AWEDHQIENA ALKFGAKNKE VSDNYEFVFE
361 DQIDFIKASV LAGDNYEDEM HAKPSQDSAG KSAFHMLQED RKALPIYTYR DQLLNAVKDH
421 QVLIIVGETG SGKTTQIPQY LHEAGYTKLG KVGCTQPRRV AAMSVAARVA QEMGGKLGHE
481 VGYSIRFEDC TSEKTILKYM TDGMLLRELL GEPDLGSYSV IIVDEAHERT LRTDILFGLV
541 KDIARARPDL KLLISSATMD AEKFSDFFDQ APIFRFPGRR YPVDICFTTA PEADYMDAAI
601 TTVLTIHVKE PLGDVLVFLP GQEEIEAVEE NLKHKIRGLG TKIRELIICP IYANLPSELQ
661 AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK MKSYNPRTGM ESLLVTPISK
721 ASATQRTGRA GRTSPGKCYR LYTAFNYYND LEDNTVPEIQ RTNLASVVLS LKSLGIHNLL
781 NFDFMDPPPS EALIKSLELL FALGALNQLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC
841 SDEIISIAAM LSIGPSIFYR PKDKQVHADN AMKNFHVGNV GDHIAFLKIY NSWKETNYST
901 QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDVSSNANE LDSIRKSIVA GFFPHTAKLQ
961 KNGSYRTVKH PQTVHIHPAS GLSQVLPRWV VYHQLVLTSK EYMRQVTELK PEWLIEIAPH
1021 YYQLKDVEDA TSKKMPKTSG RAVV
//