LOCUS       AEC09081.1               395 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana root and pollen arfgap protein.
ACCESSION   CP002685-5055
PROTEIN_ID  AEC09081.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="RPA"
                     /locus_tag="AT2G35210"
                     /gene_synonym="AGD10"
                     /gene_synonym="MATERNAL EFFECT EMBRYO ARREST 28"
                     /gene_synonym="MEE28"
                     /gene_synonym="root and pollen arfgap"
                     /gene_synonym="T4C15.12"
                     /gene_synonym="T4C15_12"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BX838903.1,INSD:BX835335.1,INSD:AU237857.1,
                     INSD:AU228956.1,INSD:DR349796.1,INSD:BP857155.1,
                     INSD:DR381378.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX820496.1,INSD:AK229368.1,INSD:BX818885.1,
                     INSD:AY085599.1,INSD:BX818837.1"
                     /note="root and pollen arfgap (RPA); FUNCTIONS IN: ARF
                     GTPase activator activity, DNA binding, zinc ion binding;
                     INVOLVED IN: embryo development ending in seed dormancy,
                     pollen development; LOCATED IN: nucleus; EXPRESSED IN: 9
                     plant structures; EXPRESSED DURING: L mature pollen stage,
                     M germinated pollen stage, 4 anthesis, petal
                     differentiation and expansion stage; CONTAINS InterPro
                     DOMAIN/s: Arf GTPase activating protein
                     (InterPro:IPR001164); BEST Arabidopsis thaliana protein
                     match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 3638
                     Blast hits to 3466 proteins in 238 species: Archae - 0;
                     Bacteria - 14; Metazoa - 1949; Fungi - 623; Plants - 559;
                     Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G35210"
                     /db_xref="TAIR:AT2G35210"
     intron_pos      24:0 (1/6)
     intron_pos      63:2 (2/6)
     intron_pos      204:0 (3/6)
     intron_pos      292:0 (4/6)
     intron_pos      334:0 (5/6)
     intron_pos      368:0 (6/6)
BEGIN
        1 MASENLNDKI SVFKKLKAKS DNKICFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS
       61 FVRSTNLDSW SSEQLKMMIY GGNNRAQVFF KQYGWSDGGK TEAKYTSRAA DLYKQILAKE
      121 VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV
      181 KKPLGAKKTG KTGGLGARKL TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY
      241 ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
      301 KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL
      361 LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV
//