LOCUS AEC09068.1 591 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-5036
PROTEIN_ID AEC09068.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G35130"
/gene_synonym="T4C15.20"
/gene_synonym="T4C15_20"
/inference="Similar to RNA sequence,
EST:INSD:EH923435.1,INSD:EH807025.1,INSD:EL220281.1,
INSD:AV531791.1,INSD:EH970050.1,INSD:AI995364.1,
INSD:EL280768.1,INSD:EH923611.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has
54782 Blast hits to 14810 proteins in 305 species: Archae
- 4; Bacteria - 41; Metazoa - 619; Fungi - 795; Plants -
51459; Viruses - 0; Other Eukaryotes - 1864 (source: NCBI
BLink)."
/db_xref="Araport:AT2G35130"
/db_xref="TAIR:AT2G35130"
intron_pos 1:2 (1/7)
intron_pos 63:1 (2/7)
intron_pos 141:0 (3/7)
intron_pos 224:1 (4/7)
intron_pos 277:0 (5/7)
intron_pos 345:2 (6/7)
intron_pos 387:1 (7/7)
BEGIN
1 MLVAGNALNC LFIDSSGFQR YLGFGVTNLN GATVKSYKQE GFVIDERGKL KRFNRKKLSR
61 KRCGSLRGRG WKYGSGFVDG IFPVLSPIAQ KILSFIQKET DPDKVADVLG ALPSTHASWD
121 DLINVSVQLR LNKKWDSIIL VCEWILRKSS FQPDVICFNL LIDAYGQKFQ YKEAESLYVQ
181 LLESRYVPTE DTYALLIKAY CMAGLIERAE VVLVEMQNHH VSPKTIGVTV YNAYIEGLMK
241 RKGNTEEAID VFQRMKRDRC KPTTETYNLM INLYGKASKS YMSWKLYCEM RSHQCKPNIC
301 TYTALVNAFA REGLCEKAEE IFEQLQEDGL EPDVYVYNAL MESYSRAGYP YGAAEIFSLM
361 QHMGCEPDRA SYNIMVDAYG RAGLHSDAEA VFEEMKRLGI APTMKSHMLL LSAYSKARDV
421 TKCEAIVKEM SENGVEPDTF VLNSMLNLYG RLGQFTKMEK ILAEMENGPC TADISTYNIL
481 INIYGKAGFL ERIEELFVEL KEKNFRPDVV TWTSRIGAYS RKKLYVKCLE VFEEMIDSGC
541 APDGGTAKVL LSACSSEEQV EQVTSVLRTM HKGVTVSSLV PKLMAKSLTV N
//