LOCUS AEC09044.1 730 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Trimeric LpxA-like enzyme protein.
ACCESSION CP002685-5006
PROTEIN_ID AEC09044.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34970"
/gene_synonym="F19I3.20"
/gene_synonym="F19I3_20"
/inference="Similar to RNA sequence,
EST:INSD:ES165309.1,INSD:EL030585.1,INSD:EH967014.1,
INSD:DR363056.1,INSD:BP602105.1,INSD:BP794884.1,
INSD:ES061189.1,INSD:BP566256.1,INSD:EG462446.1,
INSD:EL967124.1,INSD:AI996375.1,INSD:AV811165.1,
INSD:BP581555.1,INSD:BP562612.2,INSD:BP598557.1,
INSD:BP783623.1,INSD:BP784532.1,INSD:BP787518.1,
INSD:BP637405.1,INSD:EH818515.1,INSD:EL173788.1,
INSD:BE523811.1,INSD:BE529470.1,INSD:EL340159.1,
INSD:EH814987.1,INSD:ES215796.1,INSD:EL214747.1,
INSD:BP650537.1,INSD:AV795371.1,INSD:AV812306.1,
INSD:BP779792.1,INSD:AV796498.1,INSD:BP800042.1,
INSD:BP821729.1,INSD:ES031388.1,INSD:ES149741.1,
INSD:EL058647.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010333.1,INSD:AY140053.1"
/note="Trimeric LpxA-like enzyme; FUNCTIONS IN: binding,
transferase activity, translation initiation factor
activity, nucleotidyltransferase activity; INVOLVED IN:
biosynthetic process, regulation of translational
initiation; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Trimeric LpxA-like (InterPro:IPR011004),
eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307),
Armadillo-type fold (InterPro:IPR016024), Nucleotidyl
transferase (InterPro:IPR005835); BEST Arabidopsis
thaliana protein match is: Trimeric LpxA-like enzyme
(TAIR:AT4G18300.1); Has 8121 Blast hits to 7961 proteins
in 1548 species: Archae - 574; Bacteria - 3735; Metazoa -
1296; Fungi - 469; Plants - 387; Viruses - 0; Other
Eukaryotes - 1660 (source: NCBI BLink)."
/db_xref="Araport:AT2G34970"
/db_xref="TAIR:AT2G34970"
BEGIN
1 MGAQKKGGAA ARVSEDAEVQ SRHRLQAILL ADSFATKFRP VTLERPKVLL PIVNVPMIDY
61 TLAWLESAGI EEVFVFCCAH SMQVIEYLEK SEWYSHPNLL VRTIESHKSI SAGDALRYMY
121 EQQTETSQIQ GDFVLVSGDT VSNMPLADLI QEHRERKKKD EKAIMTMVIK QSKSSPLTHQ
181 SRLGTDQLFI AVDPLTKQLL HYEEDKIDHP SGSVCLEKSL LDTNPSVLVC NDMQDCYIDI
241 CSPEVLSLFE DNFDYQHLRR HFVKGVLVDD IMGYKIFTHE IHSSYAGRID NFRSYDTVSK
301 DIIQRWTYPY VPDINFSGNR PLKLGRQGIY KASDVVQSRS ADVGASTVIG YGTKIGHGDK
361 IMNSVIGNGC SIGSNVVIEG SYIWNNVTIE DGCEIRNAIV CDGVKIRAGA VLQPGVVLSF
421 NVVVGRDFVV PAYSKVSLLQ QPTTEDSDEE LEYADSSSGT ADHLSGLNLQ MESKASELGP
481 DGAGYIWEVC EGAHDEEWKH SVAPIPKDKL SEITQAIDDD DTDDESVVPT SGELKSDADS
541 INTDVNDPND DYYYFEKEVE GTVLRAVEEN IKVDLVTMEI NGLRLSFNME SADCAGATFF
601 SMIKLALDTP HNSGSELYKN AASIITKWKD LLGFYAKKID EQIEVIMKFE EMCQESHKEL
661 GPLFTQILHL LYDKDVLQED AILRWEEEKA GADEADKVYL KQCDTFIQWL KEASEEEDED
721 DEDEEEEEDN
//