LOCUS AEC09037.1 386 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transcription factor GTE6 protein.
ACCESSION CP002685-4997
PROTEIN_ID AEC09037.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="IMB1"
/locus_tag="AT2G34900"
/gene_synonym="F19I3.13"
/gene_synonym="F19I3_13"
/gene_synonym="GLOBAL TRANSCRIPTION FACTOR GROUP E1"
/gene_synonym="GTE01"
/gene_synonym="GTE1"
/gene_synonym="IMBIBITION-INDUCIBLE 1"
/inference="Similar to RNA sequence,
EST:INSD:BP859112.1,INSD:ES061073.1,INSD:ES166491.1,
INSD:BP861938.1,INSD:DR350844.1,INSD:DR350845.1,
INSD:ES037188.1,INSD:ES042188.1,INSD:EG440668.1,
INSD:DR373667.1,INSD:CB518249.1,INSD:EL185188.1,
INSD:DR350841.1,INSD:DR350842.1,INSD:ES042594.1,
INSD:ES062999.1,INSD:EH838999.1,INSD:ES120065.1,
INSD:EL253946.1,INSD:EG436296.1,INSD:ES072613.1,
INSD:EL128990.1,INSD:EL265231.1,INSD:ES201513.1,
INSD:DR350847.1,INSD:ES098401.1,INSD:DR350846.1,
INSD:ES066471.1,INSD:DR350843.1,INSD:EH910446.1,
INSD:EH929537.1,INSD:EH909718.1,INSD:EH808282.1,
INSD:ES120553.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK230434.1,INSD:AK222242.1,INSD:BX820082.1,
INSD:AY180100.1,INSD:BT026469.1"
/note="IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro
DOMAIN/s: Transcription factor GTE6 (InterPro:IPR017413),
Bromodomain, conserved site (InterPro:IPR018359),
Bromodomain (InterPro:IPR001487); BEST Arabidopsis
thaliana protein match is: general transcription factor
group E6 (TAIR:AT3G52280.1); Has 6743 Blast hits to 5369
proteins in 274 species: Archae - 2; Bacteria - 32;
Metazoa - 4105; Fungi - 1178; Plants - 592; Viruses - 0;
Other Eukaryotes - 834 (source: NCBI BLink)."
/db_xref="Araport:AT2G34900"
/db_xref="TAIR:AT2G34900"
intron_pos 7:0 (1/8)
intron_pos 50:0 (2/8)
intron_pos 121:0 (3/8)
intron_pos 147:0 (4/8)
intron_pos 219:0 (5/8)
intron_pos 252:0 (6/8)
intron_pos 271:2 (7/8)
intron_pos 322:0 (8/8)
BEGIN
1 MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF
61 YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS KGKHVSSPDL MRQFATMFRQ
121 IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF
181 KNAMRYNEEK EDVYVMAESL LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA
241 QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301 SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI
361 NKNNAKRRRE ISDAINKASI KRAKKA
//