LOCUS AEC09036.1 276 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transcription factor GTE6 protein.
ACCESSION CP002685-4998
PROTEIN_ID AEC09036.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="IMB1"
/locus_tag="AT2G34900"
/gene_synonym="F19I3.13"
/gene_synonym="F19I3_13"
/gene_synonym="GLOBAL TRANSCRIPTION FACTOR GROUP E1"
/gene_synonym="GTE01"
/gene_synonym="GTE1"
/gene_synonym="IMBIBITION-INDUCIBLE 1"
/inference="Similar to RNA sequence,
EST:INSD:ES061073.1,INSD:ES166491.1,INSD:ES037188.1,
INSD:EG440668.1,INSD:ES042188.1,INSD:DR373667.1,
INSD:CB518249.1,INSD:EL185188.1,INSD:ES042594.1,
INSD:ES062999.1,INSD:ES120065.1,INSD:EH838999.1,
INSD:EL253946.1,INSD:EG436296.1,INSD:ES072613.1,
INSD:EL128990.1,INSD:EL265231.1,INSD:ES201513.1,
INSD:ES098401.1,INSD:ES066471.1,INSD:EH910446.1,
INSD:EH929537.1,INSD:EH909718.1,INSD:EH808282.1,
INSD:ES120553.1"
/inference="similar to RNA sequence, mRNA:INSD:BX820056.1"
/note="IMBIBITION-INDUCIBLE 1 (IMB1); CONTAINS InterPro
DOMAIN/s: Bromodomain, conserved site
(InterPro:IPR018359), Bromodomain (InterPro:IPR001487);
BEST Arabidopsis thaliana protein match is: general
transcription factor group E6 (TAIR:AT3G52280.2); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="Araport:AT2G34900"
/db_xref="TAIR:AT2G34900"
intron_pos 11:0 (1/6)
intron_pos 37:0 (2/6)
intron_pos 109:0 (3/6)
intron_pos 142:0 (4/6)
intron_pos 161:2 (5/6)
intron_pos 212:0 (6/6)
BEGIN
1 MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR
61 EIYADVRLVF KNAMRYNEEK EDVYVMAESL LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH
121 ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP
181 EDLSKALKMV SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ
241 NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
//