LOCUS AEC09025.1 291 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-4982
PROTEIN_ID AEC09025.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34820"
/gene_synonym="F19I3.5"
/gene_synonym="F19I3_5"
/inference="Similar to RNA sequence,
EST:INSD:EG430024.1,INSD:EG428678.1,INSD:EG428683.1,
INSD:EG428677.1,INSD:EG430048.1,INSD:EG428684.1,
INSD:EG430025.1,INSD:EG430014.1,INSD:EG430017.1,
INSD:EG430020.1,INSD:EG428686.1,INSD:EG428681.1,
INSD:EG428682.1,INSD:EG430021.1,INSD:EG430380.1,
INSD:EG430019.1,INSD:EG430383.1,INSD:EG428675.1,
INSD:EG430381.1,INSD:EG428687.1,INSD:EG430023.1,
INSD:EG428680.1,INSD:EG428676.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF488588.1,INSD:AY234412.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
(TAIR:AT1G30670.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G34820"
/db_xref="TAIR:AT2G34820"
intron_pos 228:0 (1/1)
BEGIN
1 MSMDCLSYFF NYDPPVQLQD CFIPEMDMII PETDSFFFQS QPQLEFHQPL FQEEAPSQTH
61 FDPFCDQFLS PQEIFLPNPK NEIFNETHDL DFFLPTPKRQ RLVNSSYNCN TQNHFQSRNP
121 NFFDPFGDTD FVPESCTFQE FRVPDFSLAF KVGRGDQDDS KKPTLSSQSI AARGRRRRIA
181 EKTHELGKLI PGGNKLNTAE MFQAAAKYVK FLQSQVGILQ LMQTTKKGSS NVQMETQYLL
241 ESQAIQEKLS TEEVCLVPCE MVQDLTTEET ICRTPNISRE INKLLSKHLA N
//