LOCUS AEC09013.1 198 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear factor Y, subunit A4 protein.
ACCESSION CP002685-4966
PROTEIN_ID AEC09013.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NF-YA4"
/locus_tag="AT2G34720"
/gene_synonym="''nuclear factor Y"
/gene_synonym="nuclear factor Y"
/gene_synonym="subunit A4"
/gene_synonym="subunit A4''"
/gene_synonym="T29F13.7"
/gene_synonym="T29F13_7"
/inference="Similar to RNA sequence,
EST:INSD:EL183721.1,INSD:EL267910.1,INSD:BP621930.1,
INSD:EL335274.1,INSD:AV789804.1,INSD:ES005059.1,
INSD:EL037921.1,INSD:BP794180.1,INSD:BP622020.1,
INSD:EH811699.1,INSD:BP630615.1,INSD:BP789769.1,
INSD:ES186272.1,INSD:EL094233.1,INSD:DR245204.1,
INSD:EL183163.1,INSD:EH813415.1,INSD:EL971739.1,
INSD:DR750800.1,INSD:BP562683.3,INSD:EL074820.1,
INSD:EG521298.1,INSD:AV810623.1,INSD:EG521299.1,
INSD:EL986450.1,INSD:DR263778.1,INSD:EL185478.1"
/inference="similar to RNA sequence, mRNA:INSD:AY114711.1"
/note="''nuclear factor Y, subunit A4'' (NF-YA4); CONTAINS
InterPro DOMAIN/s: CCAAT-binding transcription factor,
subunit B (InterPro:IPR001289), CCAAT-binding factor,
conserved site (InterPro:IPR018362); BEST Arabidopsis
thaliana protein match is: nuclear factor Y, subunit A7
(TAIR:AT1G30500.2); Has 682 Blast hits to 682 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 143;
Fungi - 131; Plants - 381; Viruses - 0; Other Eukaryotes -
27 (source: NCBI BLink)."
/db_xref="Araport:AT2G34720"
/db_xref="TAIR:AT2G34720"
intron_pos 10:1 (1/4)
intron_pos 49:0 (2/4)
intron_pos 77:0 (3/4)
intron_pos 132:0 (4/4)
BEGIN
1 MTSSVHELSD NNESHAKKER PDSQTRPQVP SGRSSESIDT NSVYSEPMAH GLYPYPDPYY
61 RSVFAQQAYL PHPYPGVQLQ LMGMQQPGVP LQCDAVEEPV FVNAKQYHGI LRRRQSRAKL
121 EARNRAIKAK KPYMHESRHL HAIRRPRGCG GRFLNAKKEN GDHKEEEEAT SDENTSEASS
181 SLRSEKLAMA TSGPNGRS
//