LOCUS AEC09001.1 422 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana geranyl diphosphate synthase 1 protein.
ACCESSION CP002685-4951
PROTEIN_ID AEC09001.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="GPS1"
/locus_tag="AT2G34630"
/gene_synonym="geranyl diphosphate synthase 1"
/gene_synonym="GERANYLPYROPHOSPHATE SYNTHASE"
/gene_synonym="GPPS"
/gene_synonym="T31E10.3"
/gene_synonym="T31E10_3"
/inference="Similar to RNA sequence,
EST:INSD:AI993834.1,INSD:EH918064.1,INSD:DR278337.1,
INSD:EL041710.1,INSD:EH991448.1,INSD:EL972665.1,
INSD:AV784831.1,INSD:EL298854.1,INSD:EL061268.1,
INSD:EL245153.1,INSD:R90311.1,INSD:BP836169.1,
INSD:DR278341.1,INSD:DR278342.1,INSD:DR278338.1,
INSD:EH850807.1,INSD:EH823784.1,INSD:DR278339.1,
INSD:EG464272.1,INSD:EL980042.1,INSD:BP784503.1,
INSD:BP812256.1,INSD:BP820444.1,INSD:T44803.1,
INSD:EL010201.1,INSD:BP641268.1,INSD:DR278340.1,
INSD:H76026.1,INSD:BP656489.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT020524.1,INSD:Y17376.1"
/note="geranyl diphosphate synthase 1 (GPS1); CONTAINS
InterPro DOMAIN/s: Polyprenyl synthetase-related
(InterPro:IPR017446), Terpenoid synthase
(InterPro:IPR008949), Polyprenyl synthetase
(InterPro:IPR000092); BEST Arabidopsis thaliana protein
match is: solanesyl diphosphate synthase 2
(TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G34630"
/db_xref="TAIR:AT2G34630"
intron_pos 49:0 (1/10)
intron_pos 80:0 (2/10)
intron_pos 107:0 (3/10)
intron_pos 131:0 (4/10)
intron_pos 175:0 (5/10)
intron_pos 204:0 (6/10)
intron_pos 228:0 (7/10)
intron_pos 256:2 (8/10)
intron_pos 301:0 (9/10)
intron_pos 364:0 (10/10)
BEGIN
1 MLFTRSVARI SSKFLRNRSF YGSSQSLASH RFAIIPDQGH SCSDSPHKGY VCRTTYSLKS
61 PVFGGFSHQL YHQSSSLVEE ELDPFSLVAD ELSLLSNKLR EMVLAEVPKL ASAAEYFFKR
121 GVQGKQFRST ILLLMATALN VRVPEALIGE STDIVTSELR VRQRGIAEIT EMIHVASLLH
181 DDVLDDADTR RGVGSLNVVM GNKMSVLAGD FLLSRACGAL AALKNTEVVA LLATAVEHLV
241 TGETMEITSS TEQRYSMDYY MQKTYYKTAS LISNSCKAVA VLTGQTAEVA VLAFEYGRNL
301 GLAFQLIDDI LDFTGTSASL GKGSLSDIRH GVITAPILFA MEEFPQLREV VDQVEKDPRN
361 VDIALEYLGK SKGIQRAREL AMEHANLAAA AIGSLPETDN EDVKRSRRAL IDLTHRVITR
421 NK
//