LOCUS AEC09000.1 321 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana geranyl diphosphate synthase 1 protein.
ACCESSION CP002685-4952
PROTEIN_ID AEC09000.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="GPS1"
/locus_tag="AT2G34630"
/gene_synonym="geranyl diphosphate synthase 1"
/gene_synonym="GERANYLPYROPHOSPHATE SYNTHASE"
/gene_synonym="GPPS"
/gene_synonym="T31E10.3"
/gene_synonym="T31E10_3"
/inference="Similar to RNA sequence,
EST:INSD:AI993834.1,INSD:EH823784.1,INSD:EH850807.1,
INSD:EG464272.1,INSD:BP784503.1,INSD:EL980042.1,
INSD:EL041710.1,INSD:EH991448.1,INSD:EL972665.1,
INSD:AV784831.1,INSD:T44803.1,INSD:EL061268.1,
INSD:EL298854.1,INSD:EL010201.1,INSD:EL245153.1,
INSD:BP641268.1,INSD:R90311.1,INSD:AV823780.1,
INSD:H76026.1,INSD:BP656489.1"
/inference="similar to RNA sequence, mRNA:INSD:AY093006.1"
/note="geranyl diphosphate synthase 1 (GPS1); CONTAINS
InterPro DOMAIN/s: Polyprenyl synthetase-related
(InterPro:IPR017446), Terpenoid synthase
(InterPro:IPR008949), Polyprenyl synthetase
(InterPro:IPR000092); BEST Arabidopsis thaliana protein
match is: solanesyl diphosphate synthase 2
(TAIR:AT1G17050.1); Has 15732 Blast hits to 15728 proteins
in 2900 species: Archae - 335; Bacteria - 9322; Metazoa -
401; Fungi - 471; Plants - 404; Viruses - 0; Other
Eukaryotes - 4799 (source: NCBI BLink)."
/db_xref="Araport:AT2G34630"
/db_xref="TAIR:AT2G34630"
intron_pos 6:0 (1/8)
intron_pos 30:0 (2/8)
intron_pos 74:0 (3/8)
intron_pos 103:0 (4/8)
intron_pos 127:0 (5/8)
intron_pos 155:2 (6/8)
intron_pos 200:0 (7/8)
intron_pos 263:0 (8/8)
BEGIN
1 MVLAEVPKLA SAAEYFFKRG VQGKQFRSTI LLLMATALNV RVPEALIGES TDIVTSELRV
61 RQRGIAEITE MIHVASLLHD DVLDDADTRR GVGSLNVVMG NKMSVLAGDF LLSRACGALA
121 ALKNTEVVAL LATAVEHLVT GETMEITSST EQRYSMDYYM QKTYYKTASL ISNSCKAVAV
181 LTGQTAEVAV LAFEYGRNLG LAFQLIDDIL DFTGTSASLG KGSLSDIRHG VITAPILFAM
241 EEFPQLREVV DQVEKDPRNV DIALEYLGKS KGIQRARELA MEHANLAAAA IGSLPETDNE
301 DVKRSRRALI DLTHRVITRN K
//