LOCUS AEC08976.1 152 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana HMG-box (high mobility group) DNA-
binding family protein protein.
ACCESSION CP002685-4922
PROTEIN_ID AEC08976.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34450"
/gene_synonym="F13P17.25"
/inference="Similar to RNA sequence,
EST:INSD:EL048132.1,INSD:EL288446.1,INSD:EL175590.1,
INSD:ES170338.1,INSD:BP663677.1,INSD:EL156684.1,
INSD:EH892582.1"
/note="HMG-box (high mobility group) DNA-binding family
protein; FUNCTIONS IN: sequence-specific DNA binding
transcription factor activity; LOCATED IN: nucleus,
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: High
mobility group, superfamily (InterPro:IPR009071), High
mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST
Arabidopsis thaliana protein match is: high mobility group
B2 (TAIR:AT1G20693.3); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G34450"
/db_xref="TAIR:AT2G34450"
intron_pos 21:2 (1/5)
intron_pos 74:2 (2/5)
intron_pos 95:0 (3/5)
intron_pos 110:0 (4/5)
intron_pos 137:0 (5/5)
BEGIN
1 MTKRAPKSGP LSPSCSGGSS RNLELAVKSS EGARRSTRLR LQPLRKPKTS PKKKPVKLQT
61 KMPKKPATAF FFFLDDFRKQ YQEENPDVKS MREVIGKTCG EKWKTMTYEE KVKYYDIATE
121 KREEFHRAMT EYTKRMESGA HDESETDSDY SE
//