LOCUS AEC08948.1 391 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box and associated interaction
domains-containing protein protein.
ACCESSION CP002685-4880
PROTEIN_ID AEC08948.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34280"
/gene_synonym="F13P17.12"
/gene_synonym="F13P17_12"
/inference="Similar to RNA sequence,
EST:INSD:EG429878.1,INSD:EG429870.1,INSD:AY649253.1,
INSD:EG429877.1,INSD:EG429857.1,INSD:EG429854.1,
INSD:EG429855.1,INSD:EG429876.1,INSD:EG429865.1,
INSD:EG429859.1,INSD:EG429866.1,INSD:EG429860.1,
INSD:EG429871.1,INSD:EG429861.1,INSD:EG429875.1,
INSD:EG429862.1,INSD:EG429856.1,INSD:EG429873.1,
INSD:EG429858.1,INSD:EG429864.1,INSD:EG429872.1"
/inference="similar to RNA sequence, mRNA:INSD:AY219101.1"
/note="F-box and associated interaction domains-containing
protein; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box associated ubiquitination effector family
protein (TAIR:AT4G01640.1); Has 932 Blast hits to 918
proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 930; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="Araport:AT2G34280"
/db_xref="TAIR:AT2G34280"
BEGIN
1 MDLLPYDVVE HILERLDVKS LLNCKSVSKQ WRSTIRCRAF QERQLMHRRQ SCNPDVLLVS
61 VADEFYLLKR VHQVMRTLVL GSSVSVRILT PWEDTLYKVC QSSCDGLICL YNTYASNIVV
121 NPTTRWHREF PLSTFQRLDR YEHQVGSVSW AKLGFGKDKI NGTYKPVWLY NSAELGGLND
181 DDEDYDDEDK NNISMICQGN NNTSTFCEVF DFTTKAWRFV VPASPYRILP YQDPVYVDGS
241 LHWLTEGETT NVLSFDLHAE TFQVVSKAPF LHHHDYSSRE LIMCNLDDRL CVSEKMWPNQ
301 VIWSLDSDHK TWKEIYSIDL NITSSLFGSN GFALRPLGVF DKDKLLFCEP EYGDQLLTHD
361 PKTKSYEFDY RFFSPTTALP LCYFQSLISI L
//