LOCUS AEC08939.1 716 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin carboxyl-terminal hydrolase-
like protein, putative (DUF627 and DUF629) protein.
ACCESSION CP002685-4870
PROTEIN_ID AEC08939.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34230"
/gene_synonym="F13P17.7"
/gene_synonym="F13P17_7"
/inference="Similar to RNA sequence,
EST:INSD:EG461390.1,INSD:EG461395.1,INSD:EG444014.1,
INSD:EG433354.1,INSD:EG461392.1,INSD:EG461386.1,
INSD:EG433352.1,INSD:EG444015.1,INSD:EG461381.1,
INSD:EG443696.1,INSD:EG433368.1,INSD:EG443694.1,
INSD:EG443699.1,INSD:EG461397.1,INSD:EG444011.1,
INSD:EG444033.1,INSD:EG444013.1,INSD:EG443704.1,
INSD:EG443705.1,INSD:EG433353.1,INSD:EG461401.1,
INSD:EG461399.1,INSD:EG444012.1,INSD:EG443700.1,
INSD:EG433350.1,INSD:EG443695.1,INSD:EG461384.1,
INSD:EG461388.1,INSD:EG456255.1,INSD:EG461398.1,
INSD:EG456254.1,INSD:EG461393.1,INSD:EG461387.1,
INSD:EG461391.1,INSD:EG461394.1,INSD:EG461400.1,
INSD:EG433366.1,INSD:EG444017.1,INSD:EG444016.1,
INSD:EG461383.1,INSD:EG433369.1,INSD:EG461382.1,
INSD:EG443701.1,INSD:EG443703.1,INSD:EG461389.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY429378.1,INSD:AY429379.1"
/note="Protein with domains of unknown function (DUF627
and DUF629); CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF627 (InterPro:IPR006866), Protein of
unknown function DUF629 (InterPro:IPR006865); BEST
Arabidopsis thaliana protein match is: Protein with
domains of unknown function (DUF627 and DUF629)
(TAIR:AT2G34220.1); Has 93 Blast hits to 93 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink)."
/db_xref="Araport:AT2G34230"
/db_xref="TAIR:AT2G34230"
intron_pos 650:0 (1/2)
intron_pos 693:0 (2/2)
BEGIN
1 MMKNPEKKYD KETKKEIDDE YNLAKGYWKK GNRIEALMLT EKTISDQGKN ESSCYVHHEL
61 QGDIFYQLAE ETEITNDIKR VYLFASLDAF SMFTLPCHDA LKSFRGCVLS LIQLGDQLGI
121 KKFYRKAASK AYQALSVTNS SEKYTALNKE FDGWYGYAEE KKKEKNSNAV VTVSETSTMA
181 NQMVLKKKNP FQQLKFFWVN LDDKTKRDFL VVDFRKLIEY IQNEYGKEVK RYFRKCVISL
241 ISLHWRYWKC HICSQVNYCF TDCKMHILDK HVHKYEPEFS DRPKYVDEIL ADMICCGDWK
301 PVDIAQAANL INDRIKSQKE FVYVNGWCSD WPVAGDEKRE TILKQFSEVL KASCPRENCT
361 LSCTLWDWLI DYTEEHLDLP GVSGSYLDKC SFFKNPQCIC FLDLKHLKHI LKKFSQLTTD
421 VRESLVSKVV NQLWENSLVK ERLDLEGHTN SNLLLDKRLL CEEELELDQN ETVEHYESTG
481 IYEDVMPKGD KIVSWILDCP KIDKEFMSQM AKVAKGLHNR EIWLAVLRIV QGLVRKKESY
541 YDKRRKMLSY EKMLCEVETI CDREDTRKNV NQRSTYEFAL RTECEKLVGK QDDNRKYFWT
601 VVKDVFVKLC PPVFGVLEDM ECISKLSATV SNDEVKKSML RLRKSLKEMF LLIDSKILRN
661 ECTYKKLIDV FPKLSVVEYR LVVLPLVKKF LQDKLKKMME TNSNSVAAGD SVNMQG
//