LOCUS AEC08937.2 718 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin carboxyl-terminal hydrolase-
like protein, putative (DUF627 and DUF629) protein.
ACCESSION CP002685-4867
PROTEIN_ID AEC08937.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="MEE20"
/locus_tag="AT2G34220"
/gene_synonym="F13P17.6"
/gene_synonym="F13P17_6"
/gene_synonym="maternal effect embryo arrest 20"
/inference="Similar to RNA sequence,
EST:INSD:EG461366.1,INSD:EG434869.1,INSD:EG434866.1,
INSD:EG461364.1,INSD:EG461371.1,INSD:EG434891.1,
INSD:EG461372.1,INSD:EG461358.1,INSD:EG434870.1,
INSD:EG461377.1,INSD:EG461354.1,INSD:EG434873.1,
INSD:EG434887.1,INSD:EG461356.1,INSD:EG434875.1,
INSD:EG461360.1,INSD:EG434876.1,INSD:EG434883.1,
INSD:EG461368.1,INSD:EG456220.1,INSD:EG461376.1,
INSD:ES194858.1,INSD:EG461355.1,INSD:EG461369.1,
INSD:EG434877.1,INSD:EG461378.1,INSD:EG456221.1,
INSD:EG461375.1,INSD:EG461367.1,INSD:EG461357.1,
INSD:EG434867.1,INSD:EG434868.1,INSD:EG461370.1,
INSD:EG434881.1,INSD:EG434889.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY464606.1,INSD:DQ446595.1"
/note="maternal effect embryo arrest 20 (MEE20); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN: embryo
development ending in seed dormancy, pollen development;
LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Protein
of unknown function DUF627 (InterPro:IPR006866), Protein
of unknown function DUF629 (InterPro:IPR006865); BEST
Arabidopsis thaliana protein match is: Protein with
domains of unknown function (DUF627 and DUF629)
(TAIR:AT2G34230.1); Has 91 Blast hits to 91 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink)."
/db_xref="Araport:AT2G34220"
/db_xref="TAIR:AT2G34220"
intron_pos 647:0 (1/2)
intron_pos 690:0 (2/2)
BEGIN
1 MMMKSTDESE TKWKIDDAAE LARDFWLERD GISALKLTEK TISDHGNHEK CSSHHELQGD
61 IFYAQAKKTD DTDLKCLYLF ASVDAYSMAT LLSPNALTLR SFRGYARSLI KLGDQLRINK
121 FYEKAVSKAK LGMSITSPQG KSTDGGYFTK IKTELQNWID LATTKMQATV AVSDIGTMDN
181 QKEPGEEDTS FDRLKKIWVK LDDKTKINFL VVDFEKLIGY IQDKHGTEVK EHFQKCIPIA
241 NNLRWRCWKC HICSQVNYCF TDCKMHILDN HVHNSEPDFS ARPKCVDEIL ADMICCGDWK
301 PVDTAEAENL IKDRAKRGEE FVYVNGWCSD WPEAKDRERE NVLKQFAEVL KSSCAKENCT
361 LSCTLWDWLR DYTEENLELP GVPGIYLDQC CFFKNPQCIC FLDLKHLEHI LKYFRQLTTD
421 VRASLVPKVV NQFWENSQVK ERIDLEGVAT YNLLLDKRLL YEEELESDKI GTVEHYKSTG
481 IFEDVMPKGD KIVSWILDCP EIDREFVSQM ANGVHNSKLW LAALRIVRCV IRKKESYYDK
541 RRKMLTYEKM LGEAETICDR EDTRKNVNQR STYESALRMK CEDLVGKQDD DTKCFLSVVR
601 DVFERQSSPS FEVFEDKKCI SELSSTVPND DVKKSLLTLR KSLKEKFPLI DSKILQNKST
661 YEKLIDVFPK LSAVEYRLVV LPFVKKFLQD KLKKMMKTNS SSVAAGDSAE RKPKKRHL
//