LOCUS AEC08935.1 222 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002685-4863
PROTEIN_ID AEC08935.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34200"
/gene_synonym="F13P17.4"
/gene_synonym="F13P17_4"
/inference="Similar to RNA sequence,
EST:INSD:EG441147.1,INSD:EG441118.1,INSD:EG429447.1,
INSD:EG429456.1,INSD:EG504288.1,INSD:EG429445.1,
INSD:EG429457.1,INSD:EG429436.1,INSD:EH816339.1,
INSD:EG429437.1,INSD:EG441145.1,INSD:EG441167.1,
INSD:EG441137.1,INSD:EG429459.1,INSD:EG429460.1,
INSD:EG429439.1,INSD:EG434446.1,INSD:EG429435.1,
INSD:EG441143.1,INSD:EG429442.1,INSD:EG441123.1,
INSD:EG434445.1,INSD:EG429450.1,INSD:ES182386.1,
INSD:EG441139.1,INSD:EG429438.1,INSD:EG429455.1,
INSD:EG441122.1,INSD:EG429446.1,INSD:EG429461.1,
INSD:EG429443.1,INSD:EG429444.1,INSD:EG429458.1,
INSD:EG504286.1,INSD:EG429440.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY247802.1,INSD:DQ056564.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: zinc ion binding; LOCATED IN: membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
C3HC4 RING-type (InterPro:IPR018957), Zinc finger,
RING-CH-type (InterPro:IPR011016); BEST Arabidopsis
thaliana protein match is: RING/FYVE/PHD zinc finger
superfamily protein (TAIR:AT5G05830.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G34200"
/db_xref="TAIR:AT2G34200"
intron_pos 155:2 (1/1)
BEGIN
1 MDPKSCENSS DVKGQTSDSV SKKVLIEEEE DVKKPQQGKE NDSRMAKDVV SCSSNISAHV
61 VHEEVADNVT AVSCNEAESD ISKAKAKEFH TIDLSGVGER ICRICHFGSD QSPEASGDDK
121 SVSPELIEIG CKCKNELGLA HFHCAEAWFK LRGNSVCEIC GCTAKNVTVR LMEDWSGERD
181 NTLDGRRRRG RGQSCCIFMV FLLTILLLHW FFKKISGYYQ NT
//