LOCUS AEC08926.1 130 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Alba DNA/RNA-binding protein protein.
ACCESSION CP002685-4849
PROTEIN_ID AEC08926.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34160"
/gene_synonym="T14G11.28"
/gene_synonym="T14G11_28"
/inference="Similar to RNA sequence,
EST:INSD:DR350780.1,INSD:EL127994.1,INSD:DR350781.1,
INSD:DR350775.1,INSD:DR350777.1,INSD:DR350787.1,
INSD:ES061228.1,INSD:DR350773.1,INSD:DR350778.1,
INSD:EL295501.1,INSD:ES213303.1,INSD:EL228465.1,
INSD:EL184858.1,INSD:ES144663.1,INSD:BP859253.1,
INSD:EL042123.1,INSD:DR350783.1,INSD:EH897729.1,
INSD:EG483342.1,INSD:ES137379.1,INSD:AU229516.1,
INSD:EL267000.1,INSD:DR350769.1,INSD:ES098129.1,
INSD:DR350768.1,INSD:AU238343.1,INSD:DR350785.1,
INSD:DR350771.1,INSD:ES132636.1,INSD:DR350786.1,
INSD:ES105169.1,INSD:AA713281.1,INSD:DR350779.1,
INSD:DR350782.1,INSD:DR350770.1,INSD:DR350772.1,
INSD:EL977931.1,INSD:DR350774.1,INSD:T88451.1,
INSD:EH826317.1,INSD:DR350776.1,INSD:EL047651.1,
INSD:DR350784.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT026504.1,INSD:BT011930.1,INSD:AY084411.1,
INSD:AK117501.1"
/note="Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic
acid binding; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein
(InterPro:IPR002775), Uncharacterised conserved protein
UCP030333, DNA/RNA-binding Alba-related
(InterPro:IPR014560); BEST Arabidopsis thaliana protein
match is: Alba DNA/RNA-binding protein (TAIR:AT1G29250.1);
Has 155 Blast hits to 155 proteins in 32 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink)."
/db_xref="Araport:AT2G34160"
/db_xref="TAIR:AT2G34160"
intron_pos 41:0 (1/4)
intron_pos 57:1 (2/4)
intron_pos 78:1 (3/4)
intron_pos 100:0 (4/4)
BEGIN
1 MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE LSALGMAIAT
61 VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI EITLVKSEKF DELMAAANEE
121 KEDAEAQVQN
//