LOCUS AEC08920.1 345 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nonsense-mediated mRNA decay-like
protein protein.
ACCESSION CP002685-4839
PROTEIN_ID AEC08920.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G34100"
/gene_synonym="T14G11.22"
/gene_synonym="T14G11_22"
/inference="Similar to RNA sequence,
EST:INSD:EG433587.1,INSD:EG418191.1,INSD:EG418194.1,
INSD:EG447906.1,INSD:EG433581.1,INSD:EG428727.1,
INSD:EG418239.1,INSD:EG447920.1,INSD:EG428734.1,
INSD:EG447911.1,INSD:EG433589.1,INSD:EG433582.1,
INSD:EG428550.1,INSD:EG433586.1,INSD:EG433588.1,
INSD:EG418238.1,INSD:EG418221.1,INSD:EG418236.1,
INSD:EG418240.1,INSD:EG418234.1,INSD:EG428731.1,
INSD:EG428549.1,INSD:EG418233.1,INSD:EG433585.1,
INSD:EG418235.1,INSD:EG428732.1,INSD:EG433590.1,
INSD:EG418193.1,INSD:EG447904.1,INSD:EG428725.1,
INSD:EG428551.1,INSD:EG418192.1,INSD:EG428534.1,
INSD:EG447909.1,INSD:EG447915.1,INSD:EG428548.1,
INSD:EG447913.1,INSD:EG447951.1,INSD:EG418232.1,
INSD:EG447922.1,INSD:EG418237.1,INSD:EG447921.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: sperm cell,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 10185 Blast hits to 4535 proteins in
413 species: Archae - 41; Bacteria - 4951; Metazoa - 1579;
Fungi - 1007; Plants - 277; Viruses - 100; Other
Eukaryotes - 2230 (source: NCBI BLink)."
/db_xref="Araport:AT2G34100"
/db_xref="TAIR:AT2G34100"
intron_pos 31:0 (1/4)
intron_pos 115:1 (2/4)
intron_pos 153:0 (3/4)
intron_pos 244:0 (4/4)
BEGIN
1 MGGVEGNQWF DKFMDEVGLV FTKVDESIQK SIELWTELTK DIFDDQPNQD LTGQPDNGGS
61 GDEHSSQYPV SEVKERPIQH WYMCLSDVKE KPLQHWSMCI AEVKEKPSQH WAMRASKFPE
121 SFTQAQGGDD CYENYGDGAD GIDDDDYDEE NSESSLKWNC DYQLLKSGYL SFDEEEEEDN
181 DDEEDVDIFS EDSDDSWNED FDDEDEEADT TVFKYSENMS ELDLGSATNY TPSSYDHRNE
241 KDSGSSLTWK GGYQQLYNVD TSSDEEDEES CDEEDDEAGE YHSEEAMEMS REQRMSELRK
301 VLHDDEDDVS QGFVNVRRET IAKNTEFGEV ETLLPDGDWV YVKSA
//