LOCUS AEC08895.1 182 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002685-4804
PROTEIN_ID AEC08895.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G33845"
/inference="Similar to RNA sequence,
EST:INSD:BP619287.1,INSD:DR291372.1,INSD:ES077767.1,
INSD:EH801840.1,INSD:AV816997.1,INSD:EL073862.1,
INSD:BP810617.2,INSD:ES035083.1,INSD:EH958075.1,
INSD:BP618128.1,INSD:EL031721.1,INSD:BP668375.1,
INSD:DR291374.1,INSD:BP652873.1,INSD:BP786021.1,
INSD:ES127603.1,INSD:EL120937.1,INSD:DR374874.1,
INSD:ES117006.1,INSD:AV815992.1,INSD:ES126055.1,
INSD:EL218624.1,INSD:EH908482.1,INSD:BP624502.1,
INSD:DR291373.1,INSD:EL057067.1,INSD:DR291368.1,
INSD:DR291370.1,INSD:DR291371.1,INSD:AV832315.1,
INSD:EL291817.1,INSD:DR291367.1,INSD:ES090058.1,
INSD:BP649381.1,INSD:ES197656.1,INSD:AV820607.1,
INSD:EL095485.1,INSD:EH885722.1,INSD:DR291375.1,
INSD:AV809421.1,INSD:DR291369.1,INSD:BP601792.1,
INSD:AV831409.1,INSD:DR291366.1,INSD:DR231815.1,
INSD:ES189840.1,INSD:EL974927.1,INSD:EL996396.1,
INSD:EL047840.1,INSD:EL205449.1,INSD:BP796225.1,
INSD:DR291365.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821573.1,INSD:BX821799.1,INSD:AY136315.1,
INSD:BT000423.1,INSD:AY087128.1"
/note="Nucleic acid-binding, OB-fold-like protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Nucleic
acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic
acid-binding, OB-fold (InterPro:IPR012340); BEST
Arabidopsis thaliana protein match is: Nucleic
acid-binding, OB-fold-like protein (TAIR:AT4G28440.1); Has
251 Blast hits to 251 proteins in 51 species: Archae - 23;
Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 168;
Viruses - 30; Other Eukaryotes - 24 (source: NCBI BLink)."
/db_xref="Araport:AT2G33845"
/db_xref="TAIR:AT2G33845"
intron_pos 120:1 (1/1)
BEGIN
1 MASNTSNDNF QHRPRQRNGP PPPRRQGRNP PPPSSSTRTS QNQPPQHTPQ EKKKPVFVKV
61 DQLKPGTSGH TLTVKVVDQN SVPQKPGAAS SSHLRPARIS ECLVGDETAC ILFTARNDQV
121 ELMKPGATVN LRNAKIDMFK GSMRLAVDKW GRIEATEPAD ITVKEDNNLS LVEYELVNVV
181 EE
//