LOCUS AEC08881.1 583 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-4785
PROTEIN_ID AEC08881.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G33760"
/gene_synonym="T1B8.7"
/gene_synonym="T1B8_7"
/inference="Similar to RNA sequence,
EST:INSD:EG421457.1,INSD:EG421456.1,INSD:EG421458.1,
INSD:EG421460.1,INSD:EG421455.1,INSD:EG421459.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT4G21065.1); Has 37581 Blast hits to 14235
proteins in 274 species: Archae - 1; Bacteria - 10;
Metazoa - 234; Fungi - 87; Plants - 36686; Viruses - 0;
Other Eukaryotes - 563 (source: NCBI BLink)."
/db_xref="Araport:AT2G33760"
/db_xref="TAIR:AT2G33760"
BEGIN
1 MTTKVAANSA AYEAIVRAGP RVKQLQQVHA HLIVTGYGRS RSLLTKLITL ACSARAIAYT
61 HLLFLSVPLP DDFLFNSVIK STSKLRLPLH CVAYYRRMLS SNVSPSNYTF TSVIKSCADL
121 SALRIGKGVH CHAVVSGFGL DTYVQAALVT FYSKCGDMEG ARQVFDRMPE KSIVAWNSLV
181 SGFEQNGLAD EAIQVFYQMR ESGFEPDSAT FVSLLSACAQ TGAVSLGSWV HQYIISEGLD
241 LNVKLGTALI NLYSRCGDVG KAREVFDKMK ETNVAAWTAM ISAYGTHGYG QQAVELFNKM
301 EDDCGPIPNN VTFVAVLSAC AHAGLVEEGR SVYKRMTKSY RLIPGVEHHV CMVDMLGRAG
361 FLDEAYKFIH QLDATGKATA PALWTAMLGA CKMHRNYDLG VEIAKRLIAL EPDNPGHHVM
421 LSNIYALSGK TDEVSHIRDG MMRNNLRKQV GYSVIEVENK TYMFSMGDES HQETGEIYRY
481 LETLISRCKE IGYAPVSEEV MHQVEEEEKE FALRYHSEKL AVAFGLLKTV DVAITIVKNL
541 RICEDCHSAF KYISIVSNRQ ITVRDKLRFH HFQNGSCSCL DYW
//