LOCUS AEC08872.1 218 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002685-4776
PROTEIN_ID AEC08872.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G33710"
/gene_synonym="T1B8.3"
/gene_synonym="T1B8_3"
/inference="Similar to RNA sequence,
EST:INSD:EL226848.1,INSD:DR750872.1,INSD:AV809720.1,
INSD:AV830040.1,INSD:DN604522.1,INSD:CB254339.1,
INSD:DR750871.1,INSD:CB254486.1,INSD:EL298958.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY136456.1,INSD:BT000236.1"
/note="Integrase-type DNA-binding superfamily protein;
CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type
(InterPro:IPR016177), Pathogenesis-related transcriptional
factor/ERF, DNA-binding (InterPro:IPR001471); BEST
Arabidopsis thaliana protein match is: Integrase-type
DNA-binding superfamily protein (TAIR:AT5G61890.1); Has
6058 Blast hits to 5797 proteins in 256 species: Archae -
0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6019;
Viruses - 6; Other Eukaryotes - 31 (source: NCBI BLink)."
/db_xref="Araport:AT2G33710"
/db_xref="TAIR:AT2G33710"
intron_pos 61:1 (1/1)
BEGIN
1 MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ
61 EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD TAEEAALAYD KAAFEFRGHK
121 AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN
181 LSMNMLSSSS SSLNHQGLRP NLEDGENVKN ISIHKRRK
//