LOCUS AEC08825.1 236 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Caleosin-related family protein protein.
ACCESSION CP002685-4715
PROTEIN_ID AEC08825.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RD20"
/locus_tag="AT2G33380"
/gene_synonym="Arabidopsis thaliana caleosin 3"
/gene_synonym="AtCLO3"
/gene_synonym="AtRD20"
/gene_synonym="caleosin 3"
/gene_synonym="CALEOSIN 3"
/gene_synonym="CLO-3"
/gene_synonym="CLO3"
/gene_synonym="F4P9.15"
/gene_synonym="F4P9_15"
/gene_synonym="peroxygenase 3"
/gene_synonym="PXG3"
/gene_synonym="RESPONSIVE TO DESSICATION 20"
/inference="Similar to RNA sequence,
EST:INSD:CD533598.1,INSD:BP644305.1,INSD:BP641241.1,
INSD:BP624448.1,INSD:BP833201.1,INSD:AV795539.1,
INSD:BP617190.1,INSD:DR356780.1,INSD:CD531248.1,
INSD:BP823721.1,INSD:BP658055.1,INSD:CB256016.1,
INSD:BP817031.1,INSD:BP644821.1,INSD:CD533222.1,
INSD:EG480591.1,INSD:DR356794.1,INSD:ES197677.1,
INSD:DR356791.1,INSD:BP828879.1,INSD:ES039432.1,
INSD:CD533721.1,INSD:DR356787.1,INSD:DR356786.1,
INSD:DR356785.1,INSD:AV790452.1,INSD:CD532245.1,
INSD:CD534159.1,INSD:AV567303.1,INSD:ES015014.1,
INSD:BP652160.1,INSD:DR356789.1,INSD:EH868488.1,
INSD:CD533996.1,INSD:EG515802.1,INSD:BP842867.1,
INSD:BU636589.1,INSD:BP585682.1,INSD:BP662514.1,
INSD:BP644958.1,INSD:CD529649.1,INSD:BP827979.1,
INSD:AV556657.1,INSD:BP637632.1,INSD:AV560958.1,
INSD:CB264208.1,INSD:BP646007.1,INSD:BP639000.1,
INSD:BP594564.1,INSD:BP644937.1,INSD:BP656224.1,
INSD:CD532387.1,INSD:CD531269.1,INSD:CD533719.1,
INSD:BP818691.1,INSD:BP654220.1,INSD:BP657942.1,
INSD:DR356795.1,INSD:BP858395.1,INSD:BP841606.2,
INSD:DR356779.1,INSD:BP864063.1,INSD:AV786080.1,
INSD:CD534186.1,INSD:DR356778.1,INSD:CD529532.1,
INSD:BP592483.1,INSD:AV816722.1,INSD:BP812777.1,
INSD:CB256758.1,INSD:CD529565.1,INSD:CD531669.1,
INSD:DR356782.1,INSD:DR356788.1,INSD:BP636017.1,
INSD:BP561617.1,INSD:EG515803.1,INSD:BP639007.1,
INSD:BP586568.1,INSD:BP815375.1,INSD:BP636381.1,
INSD:AV802065.1,INSD:BP630530.1,INSD:CD529581.1,
INSD:AV817559.1,INSD:BP653038.1,INSD:BP630609.1,
INSD:CD529091.1,INSD:BP830993.1,INSD:EG492608.1,
INSD:BP796044.1,INSD:BP638558.1,INSD:DR356793.1,
INSD:BP812618.1,INSD:BP830569.1,INSD:CD531462.1,
INSD:CD533718.1,INSD:EG492641.1,INSD:BP652905.1,
INSD:DR356783.1,INSD:BP824121.1,INSD:AV811270.1,
INSD:CD532261.1,INSD:BP640394.1,INSD:AV788274.1,
INSD:CD531268.1,INSD:BP819812.1,INSD:CD534352.1,
INSD:EG480590.1,INSD:ES147668.1,INSD:BP645669.1,
INSD:CD534175.1,INSD:BP658790.1,INSD:DR356781.1,
INSD:AV800465.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY062661.1,INSD:AY093321.1,INSD:AY096405.1,
INSD:BX820054.1,INSD:AY063964.1,INSD:AB039924.1"
/note="RESPONSIVE TO DESSICATION 20 (RD20); FUNCTIONS IN:
lipoxygenase activity, calcium ion binding; INVOLVED IN:
in 7 processes; LOCATED IN: chloroplast membrane,
microsome, vacuole; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST
Arabidopsis thaliana protein match is: seed gene 1
(TAIR:AT4G26740.1); Has 344 Blast hits to 339 proteins in
61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
60; Plants - 279; Viruses - 0; Other Eukaryotes - 5
(source: NCBI BLink)."
/db_xref="Araport:AT2G33380"
/db_xref="TAIR:AT2G33380"
intron_pos 35:1 (1/5)
intron_pos 85:1 (2/5)
intron_pos 114:0 (3/5)
intron_pos 145:2 (4/5)
intron_pos 187:2 (5/5)
BEGIN
1 MAGEAEALAT TAPLAPVTSQ RKVRNDLEET LPKPYMARAL AAPDTEHPNG TEGHDSKGMS
61 VMQQHVAFFD QNDDGIVYPW ETYKGFRDLG FNPISSIFWT LLINLAFSYV TLPSWVPSPL
121 LPVYIDNIHK AKHGSDSSTY DTEGRYVPVN LENIFSKYAL TVKDKLSFKE VWNVTEGNRM
181 AIDPFGWLSN KVEWILLYIL AKDEDGFLSK EAVRGCFDGS LFEQIAKERA NSRKQD
//