LOCUS AEC08806.1 245 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein protein.
ACCESSION CP002685-4685
PROTEIN_ID AEC08806.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G33255"
/inference="Similar to RNA sequence,
EST:INSD:EL145250.1,INSD:EH857671.1,INSD:BP779955.1,
INSD:EG515718.1,INSD:DR263324.1,INSD:EH881686.1,
INSD:EL012448.1,INSD:AV785201.1,INSD:BP566229.1,
INSD:DR263326.1,INSD:DR333506.1,INSD:AV527785.1,
INSD:EL213121.1,INSD:EH889051.1,INSD:DR263325.1,
INSD:AA042779.1,INSD:ES188369.1,INSD:BP592201.1,
INSD:EH911539.1,INSD:BP585241.1,INSD:DR333505.1,
INSD:DR333507.1,INSD:EH861398.1,INSD:BP582612.1,
INSD:AV824063.1,INSD:BP803392.1,INSD:CB256981.1,
INSD:AV555641.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY093716.1,INSD:BX819050.1,INSD:AK221233.1,
INSD:AY058145.1,INSD:BX819366.1"
/note="Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein; FUNCTIONS IN: hydrolase activity,
catalytic activity, phosphoglycolate phosphatase activity;
INVOLVED IN: metabolic process; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Haloacid
dehalogenase-like hydrolase (InterPro:IPR005834),
HAD-superfamily hydrolase, subfamily IA, variant 1
(InterPro:IPR006439); Has 3270 Blast hits to 3270 proteins
in 1213 species: Archae - 109; Bacteria - 2717; Metazoa -
21; Fungi - 80; Plants - 57; Viruses - 0; Other Eukaryotes
- 286 (source: NCBI BLink)."
/db_xref="Araport:AT2G33255"
/db_xref="TAIR:AT2G33255"
intron_pos 112:1 (1/4)
intron_pos 126:2 (2/4)
intron_pos 147:0 (3/4)
intron_pos 192:0 (4/4)
BEGIN
1 MTFLLSRTFI SLTLRPSCSI SMANLTTNAK TRLRGVVFDM DGTLTVPVID FAAMYRAVLG
61 EDAYKRIKAE SPSGIDILHH IESWSPDKQQ KAYEIIADYE KQGIDKLQIM PGTAELCGFL
121 DSKKIKRGLI TRNVQKAIDI FHQRFEVIFS PALGREFRPY KPNPDPLLHI CSTWDIQPNE
181 VMMVGDSLKD DIACGKRAGA FTCLLDETGR YGPDDFSVSG LQPDFKVDSL SKIQNLLETN
241 FDLNP
//