LOCUS AEC08755.1 416 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002685-4609
PROTEIN_ID AEC08755.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G32870"
/gene_synonym="T21L14.19"
/gene_synonym="T21L14_19"
/inference="Similar to RNA sequence,
EST:INSD:EG434043.1,INSD:AI994256.1,INSD:EL247391.1,
INSD:EG434036.1,INSD:AV820581.1,INSD:EG433972.1,
INSD:EG434045.1,INSD:CB262080.1,INSD:EG434023.1,
INSD:BU635351.1,INSD:EG434020.1,INSD:EH876372.1,
INSD:EG434027.1,INSD:EH979982.1,INSD:R90396.1,
INSD:BU636678.1,INSD:EH831576.1,INSD:EL170318.1,
INSD:EL327705.1,INSD:EG434017.1,INSD:EG434019.1,
INSD:EG434034.1,INSD:EL005700.1,INSD:EG434032.1,
INSD:EG434025.1,INSD:BP787668.1,INSD:EG434048.1,
INSD:EL220753.1,INSD:EH919945.1,INSD:EL228646.1,
INSD:EG434037.1,INSD:AV819008.1,INSD:EG434033.1,
INSD:F13726.1,INSD:EL062140.1,INSD:EG434047.1,
INSD:EG434046.1,INSD:EL261066.1,INSD:EL315799.1,
INSD:EL309922.1,INSD:EL004726.1,INSD:EL209182.1,
INSD:AI997470.1,INSD:EL199428.1,INSD:AV818941.1,
INSD:EG434044.1,INSD:EG434030.1,INSD:EH859076.1,
INSD:EH956061.1,INSD:EG433973.1,INSD:EL227015.1,
INSD:EL132328.1,INSD:AV820751.1,INSD:EG434035.1,
INSD:EH819364.1,INSD:EL253049.1,INSD:AV832047.1,
INSD:EH803665.1,INSD:EH925508.1,INSD:EL295746.1,
INSD:EL236939.1,INSD:EG434042.1,INSD:F13725.1,
INSD:EH825846.1,INSD:EH885789.1,INSD:EL207473.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY219131.1,INSD:BX819568.1,INSD:BX820209.1,
INSD:AY954811.1,INSD:BT002451.1"
/note="TRAF-like family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083), TRAF-type (InterPro:IPR013322); BEST
Arabidopsis thaliana protein match is: TRAF-like family
protein (TAIR:AT2G32880.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G32870"
/db_xref="TAIR:AT2G32870"
intron_pos 111:1 (1/5)
intron_pos 154:2 (2/5)
intron_pos 205:1 (3/5)
intron_pos 305:2 (4/5)
intron_pos 360:1 (5/5)
BEGIN
1 MNNSFRNKIH EQSKENLSDD RHKKSDRTLI VFNRKTPLYF YFFEQVRYIT GSIYILIETP
61 SSRNLPIYSN ICIPISSHPN TNYRPKKRKK NPPTVYLTTI ILIMGLLSLE DTIKEKLKDR
121 KNAHFMLVDG MSKLLTEKVK NCQSLDFQVS GVKWRLVIRL SRGRKDHLSF VLEITDEKCT
181 GSTWDVKFNF KIGIVPQTGP DYCFVLVGHQ NEKKRSQGLA NFISHTDLKE RFLVNDKAGF
241 YAEISDVQPN FPVTRIPRTM GTAERFKLIE FSPKNSRFTW KITQFSSFDG EEHSSYEFTV
301 GPRRWKLVMY PKGNGDGKGN SLSLYLFASD YVTNGPKGGT LAIYKLRVLD QLNRNHCETE
361 CRYWFPYNPV NQMDSLWGRP KFLPLEELHK SSRGFLVNDQ IYIGVEISIV STTEYL
//