LOCUS AEC08709.1 385 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Lycopene beta/epsilon cyclase protein protein.
ACCESSION CP002685-4558
PROTEIN_ID AEC08709.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G32640"
/gene_synonym="T26B15.22"
/inference="Similar to RNA sequence,
EST:INSD:EH827067.1,INSD:EH865206.1,INSD:ES008855.1,
INSD:BP659104.1,INSD:DR293997.1,INSD:AV829321.1,
INSD:BP814924.1,INSD:AV795591.1,INSD:EH813125.1,
INSD:EL172013.1,INSD:BE522111.1,INSD:BP795491.1,
INSD:ES181138.1,INSD:EH831081.1,INSD:AV805591.1,
INSD:AV826580.1,INSD:DR293996.1,INSD:DR375739.1"
/note="Lycopene beta/epsilon cyclase protein; FUNCTIONS
IN: oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen; INVOLVED
IN: carotenoid biosynthetic process; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Lycopene beta/epsilon cyclase (InterPro:IPR008671); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="Araport:AT2G32640"
/db_xref="TAIR:AT2G32640"
intron_pos 45:0 (1/10)
intron_pos 84:1 (2/10)
intron_pos 147:0 (3/10)
intron_pos 183:0 (4/10)
intron_pos 204:2 (5/10)
intron_pos 240:0 (6/10)
intron_pos 268:0 (7/10)
intron_pos 317:0 (8/10)
intron_pos 360:0 (9/10)
intron_pos 382:2 (10/10)
BEGIN
1 MVVLQIHQFN GFVSSVSRAQ TNQGRRRAST TVCVQTQLAP SLTQKIMESI SVGGEAGGAG
61 GAYSYNALKR LDNIWSNICT QPTGPQETQQ IVSRVSGFSQ DYSMGNNLVG TFDIVVCGGT
121 LGIFLATALC AKGLRVAVVE RNAIKGRDQE WNISRKEMKE LTEVRVLTED EIEEVIAAKF
181 NPNRCGFENL GDIWVEDILN LGVSPAKLVE TVKQRFISLG GVILEDSSLS SIVIYNDLAV
241 MQLSKGDTLS SRLVIDAMGN FSPILKQIKR GRKPDGMCLV VGSCAHGFKE NSSSDVIYSS
301 SSVTRVADSN VQLFWEAFPA GSGPLDRTTY MFTYTEPQST SPSLEDLLEE YWKLMPKYQG
361 VSLDELEILR VVYGIFPTYR NSFVQ
//