LOCUS AEC08662.1 163 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GPI inositol-deacylase C, putative
(DUF1218) protein.
ACCESSION CP002685-4489
PROTEIN_ID AEC08662.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G32280"
/gene_synonym="T32F6.20"
/gene_synonym="T32F6_20"
/gene_synonym="VASCULATURE COMPLEXITY AND CONNECTIVITY"
/gene_synonym="VCC"
/inference="Similar to RNA sequence,
EST:INSD:DR256038.1,INSD:EL040452.1,INSD:DR256034.1,
INSD:EL149104.1,INSD:BP835427.1,INSD:DR256033.1,
INSD:EL302759.1,INSD:DR256035.1,INSD:EL272559.1,
INSD:DR256037.1,INSD:DR256036.1,INSD:AI998500.1,
INSD:AV554370.1,INSD:EL998702.1,INSD:CB255262.1,
INSD:DR382880.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT011667.1,INSD:AK175644.1"
/note="Protein of unknown function (DUF1218); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1218 (InterPro:IPR009606);
BEST Arabidopsis thaliana protein match is: Protein of
unknown function (DUF1218) (TAIR:AT4G21310.1); Has 170
Blast hits to 169 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G32280"
/db_xref="TAIR:AT2G32280"
intron_pos 34:0 (1/2)
intron_pos 102:2 (2/2)
BEGIN
1 MTKIGGILVC LVIVGLDVAA AILGIQAEVA QNQVKHMRLW LFECREPSQD AFRLGLGAAA
61 ILVMAHVLLN LVGGCLCICS QDEFQRSSST RQISMACLVL TWIVFAVGFG SIVIGTMSNS
121 KSRSSCGFTH HHFLSIGGIL CFLHALFCVA YYVSATAAKD EAK
//